Pseudomonas putida KT2440: PP_2790
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Entry
PP_2790 CDS
T00114
Name
(GenBank) Sigma-54 dependent sensory box protein
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppu03000
]
PP_2790
Transcription factors [BR:
ppu03000
]
Prokaryotic type
Helix-turn-helix
Other families
PP_2790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
HTH_8
PAS_4
PAS
Mg_chelatase
PAS_8
AAA_5
PAS_7
PAS_9
AAA_2
HTH_30
AAA
HTH_psq
PAS_10
HTH_24
HTH_23
HTH_50
AAA_22
HTH_1
HTH_10
HTH_17
HTH_Tnp_ISL3
AAA_16
TIP49
DUF2089
nSTAND3
AAA_7
DUF815
HTH_28
ATPase
HTH_AsnC-type
TsaE
Motif
Other DBs
NCBI-ProteinID:
AAN68398
UniProt:
Q88J59
LinkDB
All DBs
Position
complement(3178721..3180673)
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AA seq
650 aa
AA seq
DB search
MDALASQVVVLISHLQRPQQRSRLAHVVAGLTTDYPDTRIEVLDTSVAEALQTARELEQA
GKVDVFVCAGATAAYLRKHLTRPVLAMRVGSGDLLRALGQARERSSQVAVLSYNHVNHDL
QAMAALFTVQVHQAAYTSLEEARQAVEQAAQLGCRSIIGSSTVVELAEQAGLHGVLSLSE
DTARKALEEALGILDTQRVEIAKRRHLNAVLRHIPAGVAAVDNQGVVQSLNPALAQLLDL
PVSAALGRPLQQLCPELDLQQALQEGTGEENRVMRLGSHAVVSNLLPILENGERTGLVLT
CQDITVVQRADQRIRSTRRPGAFTARYRLDQLNGNSKANREMLQLAKRFATSHSTILITG
ESGTGKELLAQGIHNESPRRQGPFVAINCAAFPESLLESELFGYEEGAFSGSRKGGKPGL
FEAAHRGTLFLDEIGDMPVSLQTRLLRVLQEREVLRLGSTEPIAIDVRIIAATHKDLRSA
MDDGDFRTDLYFRLNILRLQTTPLRERPEDIALICRGISQRLLVQGQPPGAADIPAALLP
YLERYAWPGNVRELENVIERAMLSARELLEEHRVNEQYLARVLPELCEGPPPSPARKKSS
GETDLHTIGKVAQLRHVKETLESCRGNLDEAARRLGISRTTLWRRLRSAN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcttgcctcccaggtcgtcgtgctgatcagccacttgcagcgcccccaacaa
cggagccggctcgcccatgtggtggccgggctcacgacggactacccagatactcgtatc
gaagtcctcgacacctcggtggctgaagcactacagaccgcccgagaattggagcaggca
ggcaaggtcgatgtgttcgtctgcgccggggcgaccgccgcctacctgcgcaaacacctg
acacgcccggtactggcgatgcgcgtgggcagtggcgacctgctacgggcattggggcag
gcccgcgaacgctcctcccaagtggccgtgctcagctacaaccatgtcaaccacgacctg
caagccatggccgcgctcttcaccgtccaggttcaccaggccgcctacacctccctggaa
gaggcccgccaggccgtcgaacaggcggcccagctaggctgtcgcagcatcatcggctcg
tcgacggtggtggagctggcggagcaggcagggctgcatggcgtgctgtcgctgagcgaa
gacaccgcgcgcaaagcgctggaggaagccctgggcattctcgacactcaacgcgtcgag
atcgccaaacggcggcatctgaatgccgtgctgcggcatatccccgccggcgtagcagcg
gtcgacaaccaaggcgtggtgcagtcgctcaaccctgcccttgcgcagctgctggacctg
ccggttagcgcagcgctgggccggccgctgcagcagctgtgcccggaactggacctgcag
caggcgctgcaggaaggcacgggtgaagaaaaccgcgtgatgcggctcggctcgcacgcc
gtggtgagcaatttactgcctatcctggagaacggcgaacgtaccggcctggtcctgacc
tgccaggacatcactgttgtgcaacgtgccgaccaacgcatccgatccacccgccgccct
ggtgcgttcactgcccgttaccggctcgaccagctcaacggcaacagcaaggccaaccgc
gagatgctgcagttggccaagcgttttgccaccagccattcgaccatcctgattaccggt
gaaagcggcaccggcaaggaactgctcgcccagggaatccataacgaaagcccgcgccgg
caaggccccttcgtcgccatcaactgcgcggcgtttcccgagtcgttgctggaaagtgaa
ttgttcggctacgaggaaggcgccttcagcggctcgcgcaaaggtggcaagccaggcctg
ttcgaagcagcacaccgcggcacgctgttcctcgacgagatcggcgacatgccggtgtcg
ctgcaaacacgcctgctgcgcgtgctgcaagagcgcgaagtcctgcgcctgggcagcacc
gaaccgattgccatcgacgtgcgcatcattgccgccacccacaaggacctgcgcagcgcc
atggacgatggcgatttccgtaccgacctgtatttccggctcaacatcctgcgtctgcag
accaccccgctgcgagagcgccctgaggacattgccctgatctgccggggcatcagccag
cgcctgctcgttcaggggcaaccaccgggagctgcagacatccccgccgcgctgctgccg
taccttgaacgctatgcctggccgggcaatgtccgggaactggagaatgtgatcgagcgc
gcgatgctctcggcacgcgaactgcttgaggaacaccgcgtgaacgagcagtacctagca
cgcgtgctacctgaactgtgcgaaggccctcccccttcacccgcccggaaaaagtcgtca
ggcgaaacggacctgcacaccatcggcaaggtcgcgcaactgcgccatgtaaaggaaacg
ttggaaagctgccgcggcaacctcgacgaagccgcccgccgtctcggcatcagccgcaca
accttgtggcggcgcttgcgatctgccaattga
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