Pseudomonas putida KT2440: PP_3062
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Entry
PP_3062 CDS
T00114
Name
(GenBank) putative Pyocin R2_PP, tail length determination protein
Organism
ppu
Pseudomonas putida KT2440
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Gene cluster
GFIT
Motif
Pfam:
PhageMin_Tail
Motif
Other DBs
NCBI-ProteinID:
AAN68670
UniProt:
Q88ID7
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Position
3441242..3444511
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AA seq
1089 aa
AA seq
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MAGKVALSLVIGGAVASSLGAAFKTAENGIQKLEAKGNKAKVLKSTIGETIKLREEWKRA
HDSGAAGADKLLRKLDSNLDSLRKQGIEVGKLGREYQRLGREARAADLQLKGHQQLQAGK
ESLKSNIGRAVVATGAAAVPTMISANYQAIIRDIAIKADIANKPEEQQLTRTVIGTAKDT
GMSRNDVADLVNQLVGAGMDLDKALSYAPVAAKFAVGQGASGVDTASMIQALEQNAKISD
PKVMQQALEAIAYQGQAGSFEASDMAKWFPQLLAGMEKNGITGLDAVTSLGSMLQVQMKT
AGSSDEAANNFKNWMEKIGAGDIKKAYSDVGIDYQASLNTGLQKGMNVIEASMALAMRYV
EKTDPAKAKQIKDAQAKIDKEVDPEKAKAALEALEKTLRTGDIFADMQVKAALTAYGQNR
GLYEELKADSKKASGILDKNLAERRETSAQQWAELGQAVDDSMRSIGDAIRPATDMAAQG
LTKVAHGITSLSDQFPSIAMGIGGITAAVIAFLSARSALRVGRGVFNIAMGRGLEGFAGR
AGKAERAPIKLPKTGSKVVDTGLGLLGKVFSAGSKGAAQADDPGAAANDTQRVFVVNADA
IGGIGSSVANSGPARGSRRSRRRERRRAARQGAPVRPAPAVEAPKPAKAAVAKVRPLPAA
LSALTAADDLGKVARSVRGVSRLAKNLPGGNIIDAGAAAIDVALNAETKDEKAEGYGGAA
GSLAGTLAGAAAGAAIGSVVPVIGTAVGGAVGAVLGGMGGESFGGWLGKRWFGDEPADDQ
AEPESPPALGKALRVTVMPAKEVEPEPATAPVKADPAVSYDPRDPASKDPVVLPALAADK
VRFPGADLVRPPASPESPADPAAPEAQPEPSVPKLGDTVREVASPAPVEPAVSYDPRDPA
SKDPFLLPALTANKVRFPGAGLVRPQAEPEPPTPKLGAAVREAAPAPVPAKPVVSYDPRD
PASKDPFLLPAMTANKVRFPGADLVRPQPQPEPPAVLGDVVREMAKAAPSAPKLPEVPPP
AKASPPPAPKVDNTFTFAPVMPLTVHGDVKDPNQLLNEMANGMRGLFDAWQREVAARTSS
AQLFDQPHV
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaaggtagcgttatcgctggtgatcggcggcgccgtcgcgtcgtcgctcggc
gccgcgttcaagaccgccgaaaacggcatccagaagctggaagccaagggcaacaaggcc
aaggtgctgaaaagcaccattggcgaaaccatcaagctgcgcgaggaatggaagcgcgcg
cacgacagcggcgcggccggcgccgacaagttgctgcgcaagctggacagcaacctggat
tcgttgcgcaagcaggggatcgaggtcggtaagctcggtcgcgagtaccagcgccttggg
cgcgaggcgcgggccgccgatctgcagctcaagggtcaccagcagctgcaggcgggcaag
gaatcgctcaagtcgaatatcggcagggcggtggtggctacgggcgccgctgctgtgccg
acgatgatcagcgcgaactatcaagcgatcatccgtgacatcgcgatcaaggctgatatc
gccaacaagcccgaggaacagcagcttacccggacggtgatcggcacggccaaagacacg
ggtatgtcacgcaatgacgtagccgacctggtcaaccagctggtcggcgccggcatggat
ctggacaaggcgctgtcgtatgcgccggtcgcggccaagttcgcggtcggccaaggcgcc
tcgggcgtcgacaccgcgtcgatgatccaggcgttggagcaaaacgccaagatcagcgac
cccaaggtcatgcagcaggcactggaggccatcgcctaccaaggccaggcgggcagcttc
gaggccagcgacatggccaagtggttcccgcaactgctggccggcatggagaagaacggc
atcaccgggctggatgcggtgacctcgctgggctccatgctgcaggtccagatgaagacc
gccggcagttccgacgaggcggcgaacaacttcaagaactggatggagaagattggcgcc
ggtgatatcaagaaggcttacagcgatgtgggcattgattatcaggcgtcactgaatacc
ggcctgcagaagggcatgaacgtcattgaggcgtccatggccctggccatgcgttacgtc
gagaagaccgacccggccaaggccaagcagatcaaggacgcccaggccaagatcgacaag
gaagtcgacccggagaaggccaaggcggcactggaagcgctggagaagaccctgcgcacc
ggcgatatcttcgccgacatgcaggtcaaggcggcgctcaccgcctacgggcagaaccgg
ggcctgtatgaggaacttaaggccgactccaaaaaggcctcgggcatcctcgacaagaac
ctggctgagcgccgcgagacctcggcgcagcagtgggccgagctgggccaggcggtggac
gattcaatgcgcagcattggcgatgccatccgcccggccaccgacatggcggcgcagggg
ctgaccaaggtcgcccatggcatcacctcgctgtcggatcagttcccgtcgatcgccatg
gggattggcggcattacggcggcggtaattgcattcctgagtgcgcgcagtgcgctgcgt
gtcggtcgcggggtgttcaacatcgccatgggccgtggcctggaagggttcgctggccgc
gctggcaaggccgagcgggcgccgatcaagttgcccaagaccggcagcaaggtggtcgac
accggccttgggctgctgggcaaggtgttttcggcgggctcgaaaggggctgcccaagcc
gatgatcccggcgcggccgccaatgacacccagcgcgtattcgtggtcaacgctgatgca
ataggcgggatcggcagtagcgttgcaaatagcggccctgcaaggggcagtcgcagaagt
cggcgccgggagcgacggcgcgcagcgcgacagggcgccccagtgcggcctgcaccggcc
gttgaggcacccaagccggccaaggctgccgtggctaaggttcggccgctgcctgcagcg
ttgtcggccctgaccgccgccgatgatctgggcaaggtggcgcgctcggtgcgcggtgtt
tcgcgtcttgccaagaatctaccaggaggcaacatcatcgatgccggtgcggctgcgatc
gatgtcgcgctgaacgctgagactaaggacgaaaaggccgagggctacggcggcgctgcc
ggcagcctggcgggcacccttgccggtgctgcagcgggggcggctattggctccgtggtg
ccggtgatcggtaccgctgtgggtggcgcggtcggcgctgtccttggtggcatggggggc
gagtcgtttggggggtggctgggcaagcgatggtttggtgacgagccggccgacgatcaa
gccgagccggaatcgccgccggcactgggtaaagcgttacgcgtaacggtgatgccagcc
aaggaagtcgagcctgagcccgccacggctccggtcaaggctgatccggcagtgtcgtat
gatccgcgcgacccggcatcgaaagacccggtcgtgttgccggcactcgcggccgacaag
gtgcgtttccctggtgctgatctggtgcggccaccggccagccctgagtcgccggcagat
cctgcagcaccggaggcacaacccgagccgtcggtgcccaagctgggcgatacggtgcgg
gaggtggccagcccggcgccggtggagccagcggtgtcgtatgacccgcgtgacccagcg
tcgaaagatccgttcctgctgccggcgctgaccgccaacaaggtgcggttccctggtgct
ggactggtacggccgcaggccgagcccgagccgccgacacccaaactgggggctgcggtg
cgggaagcagcaccggccccggtaccggccaagcccgtagtgtcgtatgacccgcgcgac
ccggcgtcgaaagatccgttcctgttgcccgccatgacggccaacaaggtgcggttccca
ggcgccgaccttgtgcggccacagcctcaacccgagccaccggccgtactgggtgatgtg
gtgcgcgagatggccaaggccgcgccatcggcgcccaagctgccggaggtgccgccacct
gctaaggcctcaccgccaccggcgccgaaggtggacaacacattcacattcgccccggtt
atgccgctcactgtccatggcgatgttaaagacccaaaccaattgctgaacgaaatggca
aacggtatgcgcgggctgtttgacgcctggcagcgcgaggtggctgcgcgcacgtcctcg
gcgcagctgttcgatcaaccccacgtttaa
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