Pseudomonas putida KT2440: PP_3577
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Entry
PP_3577 CDS
T00114
Symbol
fecI
Name
(GenBank) RNA polymerase, sigma 19 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP_3577 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppu03021
]
PP_3577 (fecI)
Transcription machinery [BR:
ppu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PP_3577 (fecI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
DUF6362
Motif
Other DBs
NCBI-ProteinID:
AAN69178
UniProt:
Q88GY8
LinkDB
All DBs
Position
complement(4058670..4059182)
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AA seq
170 aa
AA seq
DB search
MIDAAPPPEPGLPALYREHRGWLEAWLRRRMGNAWDAADLSQDTFLRILASAQPLADIRE
PRAYLLTVGKRLLSNFHQRRSLEQAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDG
LKPAIRKAFLWSQLEGLGYAEIGQRLGVCQRSVKRYMAQAYEHCLLAELQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgccgcgccgccaccggagcctggcctgcctgccctgtaccgggagcatcgc
ggctggcttgaagcctggctgcgccggcgtatgggcaatgcctgggatgccgccgacctc
agccaggatacttttctgcgcattctggccagcgcccagccgctggcagacatacgcgaa
ccgcgtgcctacctgctgactgtgggcaagcgtttgctcagcaacttccaccagcgacgt
agcctggagcaggcctaccttgatgcgttggcgcagttgcccgagcaacacgtgccgtcg
ccagaacagcgctgggtactgctcgaaaccctgcaagcactggatgaattgctcgacggc
ctcaagccggcgatacgcaaggcctttctctggagccagctggaaggcttgggctacgcc
gaaattggccagcgcctgggcgtctgccagcgctcagtgaaacgctacatggcgcaggct
tacgaacattgcctgttggccgagttgcaatga
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