Pseudomonas putida KT2440: PP_3790
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Entry
PP_3790 CDS
T00114
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00300
Lysine biosynthesis
ppu00470
D-Amino acid metabolism
ppu01100
Metabolic pathways
ppu01110
Biosynthesis of secondary metabolites
ppu01120
Microbial metabolism in diverse environments
ppu01230
Biosynthesis of amino acids
Module
ppu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
ppu_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PP_3790
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PP_3790
Enzymes [BR:
ppu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PP_3790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AAN69384
UniProt:
Q88GD4
LinkDB
All DBs
Position
4319030..4319836
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AA seq
268 aa
AA seq
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MQFYKYHAAGNDYLVYRDCVPFDCSKPMISRICDRHRGLGSDGILVPVIKEGERLSVRIY
NTDGSQAEKSGNGLRILCRYLWDQNIVAGSPFEISTKGGIVTCQVLDNGQRISIAMGQAA
FANTAAFTVDVDGTPLQLHPVSMGNPHCVVFVDQPTETLARQLGPLIERLSIFPDRTNVQ
FVRVIDRQTLEVQIWERGVGYTLSSGTSSCAAAAVSRRLGLVGPRVAVNMAGGVIMIELD
DDYHVLMQGPVCRVGLYSLDSECLAQAD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcagttttataaataccatgcggctggaaatgactaccttgtataccgggactgcgta
ccgtttgattgctccaaaccgatgatttcacgtatttgcgaccgacaccgcgggttgggc
agcgacggcatactggtgccggtgatcaaagaaggtgaacggttgtcggtacggatctac
aacacagacggttcccaggcagagaaaagtggtaatggcctgcgtattctctgccgctac
ttgtgggatcagaatatcgtggccggttcaccctttgaaatatcgaccaaaggggggatc
gtcacctgccaggtactcgacaacgggcagcggatttcgatcgccatgggccaggctgct
tttgccaatactgcggcgttcaccgttgacgtggacggcacacctttgcagttgcatccg
gtttcgatgggcaacccccattgcgtggtgttcgtggatcaaccgactgaaacgctggca
cgacagttgggaccgctcatcgagcgattgtcgatcttccccgaccgcacaaatgttcag
ttcgtgcgggtaatcgatcgtcagacgctcgaggtgcagatctgggaacggggggtcggc
tacaccctttcctccggcaccagcagttgcgctgctgcggcagtctcgcgtcgacttgga
ctggtaggtcctcgggtagcggtcaacatggccggcggcgtcatcatgatcgaactggac
gacgactatcacgtgttgatgcaagggccggtatgcagggtcggcctctactcgctggac
agtgaatgcttggctcaggcggactga
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