Pseudomonas putida KT2440: PP_3831
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Entry
PP_3831 CDS
T00114
Name
(GenBank) conserved protein of unknown function
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppu03032
]
PP_3831
03400 DNA repair and recombination proteins [BR:
ppu03400
]
PP_3831
Enzymes [BR:
ppu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PP_3831
DNA replication proteins [BR:
ppu03032
]
Prokaryotic type
DNA Topoisomerases
PP_3831
DNA repair and recombination proteins [BR:
ppu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PP_3831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
AAN69425
UniProt:
Q88G94
LinkDB
All DBs
Position
4356632..4357654
Genome browser
AA seq
340 aa
AA seq
DB search
MLDCPLPRTLHYVDDSQPGLTRRRWRDRFIYLDADGQRVRDSETLARIAALVIPPAYTDV
WICADPQGHLQATGRDARGRKQYRYHAQWRELRDQHKYGRMLAFAQALPKLRTQLEAHLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNRSYGLTTLRNRHVQVKGSTIRFQFRGK
RGVEHNVTLNDRRLANLLKRCMELPGQALFQYLDEDGQRHSVGSSEVNQFLQQLTGADFT
AKDYRTWAGSSLALNLLKPLAWEPESEAKRQVAAIVRQVATRLGNTPAVCRRCYIHPAVL
EHYALGRLANLPKNRVRKGLDPEEVALLLFLQALEEQEDH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttgactgccccctgccgcgcaccctgcactacgttgacgacagtcagccgggcctg
acccgtcggcgctggcgcgaccgtttcatctacctggatgccgatggccaacgggtacgc
gacagcgaaacccttgcgcgcatcgccgcattggtgatccccccggcctacacggatgtg
tggatctgcgccgatccgcaaggccacctgcaagccaccggccgcgatgcccgtggccgc
aagcagtaccgctaccacgcacagtggcgcgaactgcgcgaccagcacaaatacgggcgc
atgcttgcgttcgcccaagccctgccaaagctgcgcacacagctggaagcccacttggcg
cggccagggctggaccgggaaaaagtcatggcgctggtggtgagcctgctggaccacacc
ctgatccgcatcggcaaccagcgctacctgcgcgataaccggtcgtacggattgaccacc
ctgcgcaatcgccatgtgcaggtcaaaggcagcactatccgcttccagttccgcggcaag
cgcggcgtcgaacacaacgtcaccctcaacgaccggcgcttggccaacctactcaaacgc
tgcatggaactgcctgggcaggcactgtttcagtacctggatgaagatggccagcgccat
agtgtcggctccagcgaggtcaatcagtttctgcagcagttgaccggtgccgactttact
gccaaggactatcgcacctgggccggcagcagcctggcattgaacctgctaaagcccttg
gcctgggagccggagagtgaagccaaacgccaggtcgccgcaatagtccgccaggtagcc
acgcgcctgggcaatacgccggcagtgtgccggcgctgctacatccacccggcagttctg
gagcactatgccttggggcgcctggccaatttgccgaaaaaccgtgtgcgcaaaggcctg
gacccggaggaagtggccttgctgttgtttcttcaggcacttgaggaacaggaggaccat
tga
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