Pseudomonas putida KT2440: PP_4002
Help
Entry
PP_4002 CDS
T00114
Symbol
rarA
Name
(GenBank) DNA-dependent ATPase required for recombination
KO
K07478
putative ATPase
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PP_4002 (rarA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
AAA_22
Mg_chelatase
AAA_16
AAA_2
nSTAND3
AAA_14
ResIII
AAA_33
AAA_30
Sigma54_activat
AAA_24
AAA_3
AAA_28
ABC_tran
AAA_18
IstB_IS21
RNA_helicase
RsgA_GTPase
AAA_17
TsaE
NPHP3_N
DUF815
Sigma54_activ_2
NB-ARC
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
AAN69596
UniProt:
Q88FT0
LinkDB
All DBs
Position
complement(4510463..4511788)
Genome browser
AA seq
441 aa
AA seq
DB search
MDLFRSEPVAQPLAARLRPSSLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGK
TTLARLLAQFCDAHFETVSAVLAGVKEIRQAVEVAKQQAGQYGRRTILFVDEVHRFNKSQ
QDAFLPYVEDGTLLFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVNRALTEER
GLGKRNLRVGDDAFKMLMAAADGDGRRMLNFLENASDLAEDGSEIDVEMLQSLLGDSRRR
FDKGGEAFYDQISALHKSVRGSNPDGALYWFARMLDGGCDPLYIARRVVRMASEDIGNAD
PRALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYVGFKTALREAAEHGSLE
VPLHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDELEPRQYYQPVPRGLELKI
GEKLRHLADLDRNSPRQRRKP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggacctgtttcgaagcgaacccgtcgcccagcccctggccgcccgtctgcgcccgtcc
agcctggatgagtacgtcggccaggagcacctgctggcgcgcggtaaaccgctgcgcgaa
gcgctggaacaaggtgcgctgcactcgatgatcttctgggggccgcccggggtcggcaag
accacgctggcgcggttgctggcgcagttctgcgatgcgcacttcgaaacggtgtcggcg
gtgctggccggggtgaaagagatccgccaggccgtggaggtggccaaacagcaggctggc
caatatggccgtcgcaccatcctgttcgttgacgaggtgcaccgcttcaacaagtcgcag
caggacgcctttttgccctatgtcgaggacggcaccctgctgttcatcggtgccaccacc
gaaaacccgtcgttcgagctgaacaacgcgctgctgtcacgggcgcgggtgtatgtgctc
aagagcctggacgaagccgccctgcgcaagctggtcaaccgtgcgctgacggaagagcgt
ggcctgggcaagcgcaacctgcgggtgggcgacgacgccttcaagatgctgatggccgca
gccgacggcgatggccggcgcatgctcaacttcctcgagaacgcctcggacctggctgaa
gacggcagcgagatcgacgtcgagatgctacagagcctgctgggtgacagtcgccgccgc
ttcgacaaaggcggcgaggcgttctacgaccagatatccgcgctgcacaagtcggtgcgt
ggctccaatcccgatggcgccctgtactggtttgcacggatgctcgacggcggctgtgac
ccgctgtacatcgcccgccgcgtggtgcgcatggccagcgaggacatcggcaatgccgac
ccgcgtgcgcttagcctgtgcctggctgcctgggatgtgcaggagcgccttggcagcccc
gagggcgagttggcggtggcccaggccatcacctacctggcctgcgcacccaagagcaac
gcggtgtacgtgggtttcaagaccgccctgcgtgaagcggccgagcacggttcgctggag
gtgccgttgcacctgcgcaatgccccgaccaagctgatgaagcagttgggctatggcgac
gagtaccgttatgcccatgatgaacccgacgcctacgccgccggtgaggattacttcccc
gacgaactggagccgcgccagtactatcagccggtgccccgtggcctggaactgaaaatt
ggcgagaagctgcgccacctggctgacctcgaccgcaacagcccccgccagcggagaaaa
ccatga
DBGET
integrated database retrieval system
