Pseudomonas putida KT2440: PP_4269
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Entry
PP_4269 CDS
T00114
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu03030
DNA replication
ppu03430
Mismatch repair
ppu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP_4269 (dnaX)
03430 Mismatch repair
PP_4269 (dnaX)
03440 Homologous recombination
PP_4269 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppu03032
]
PP_4269 (dnaX)
03400 DNA repair and recombination proteins [BR:
ppu03400
]
PP_4269 (dnaX)
Enzymes [BR:
ppu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP_4269 (dnaX)
DNA replication proteins [BR:
ppu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PP_4269 (dnaX)
DNA repair and recombination proteins [BR:
ppu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PP_4269 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
AAA_14
ResIII
AAA_30
TIP49
PIF1
AAA_18
AAA_16
AAA_19
AAA_2
TsaE
nSTAND3
AAA_7
HasA
Rad17
SKI
Herpes_Helicase
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AAN69849
UniProt:
Q88F30
LinkDB
All DBs
Position
complement(4853025..4855100)
Genome browser
AA seq
691 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSP
ERVVEHLSHVLAAENVPFEEDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGSLDHGQVYGVLQALLEGDARALLEAVRNLAEQGPDWSGVLAEMLNVLHRVAIAQALPE
AVDNGQGDRERVLALASALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTDDAPKPVLKPTGISQATADPAGQVAAAAPVALSPPVAAVPAEPVAQAPQLEVPAPAT
ADHEPEAEADVELKAEAEAISVPEPVAEVVDLPWEEPAVAPAPLAAEPAPEPAPAPEPVA
PVAPTQAAPAHDEPPFDPSAYAAVGMERDDEPPLDEDYYGGESDPAGFSYLDELAEHVQE
DVSKPAAEPLPAAKPATGLALQWLELFPQLPVSGMTGNIAANCTLIAADGDDWLLHLDPG
QGALFNATQQRRLNEALNQHLGRTLNLRIELILPEQETPAQAAARKRAERQQDAVASIEQ
DPLIQQMIKLFGAKVRQDTIEPVEALASQGQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgaaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggccttgatcaatgccttggacaaccagcgcctgcaccatgcc
tacctgttcaccggtacccgcggggtgggcaagacgaccatcgcccgtattatcgccaag
tgcctgaactgtgaaaccggcatcacctccacgccctgtggcacctgttcggtgtgccgg
gaaatcgacgaaggccgtttcgtcgacctgatcgagatcgacgccgccagccgtaccaag
gtagaggacactcgcgaactgctcgataacgtgcagtacgcccctagccgtgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctcgacccactcattcaacgccttgctc
aagacgctggaagagccgccgccctacgtcaagttcatcctcgccaccaccgacccgcag
aagctgccggccaccatcctgtcgcgctgcctgcagttctcgttgaagaacatgagcccg
gagcgggtggtggagcacctcagccacgtacttgccgccgagaacgtgccgttcgaggaa
gatgccctgtggctgctggggcgggcggccgacggctccatgcgtgatgccatgagcctg
accgaccaggccatcgccttcggtgaaggcaaggtactggccgccgatgtacgtgccatg
ttgggtagcctcgaccatggccaggtgtatggggtcttgcaggcactgctcgaaggcgat
gccagggctttgctggaggccgtgcgtaatctggccgagcaagggccggactggtcgggc
gttctggccgaaatgctcaatgtgctgcaccgtgtagccattgcccaggcgctgcccgaa
gcggtagacaacggccagggtgatcgcgagcgggtattggcgctggcttcggcgctgccg
gccgaggatgtgcagttctattatcagatgggcctgattggccgccgtgatctgcccctt
gcgccggacccgcgcggtggcttcgagatggtgctgctgcgtatgctggcgttccgcccg
gcagacacggacgacgcaccgaagccggtgctaaagccaacggggatcagccaggccaca
gctgatcctgcagggcaggtggcagctgcggcgccggtcgcgctttcaccgcctgtcgcg
gctgtgccggcggagcctgttgcgcaagccccgcagctggaggtgccagcacccgcgacg
gctgatcatgagccggaggccgaggcagatgttgagctgaaggccgaagccgaggccatc
tccgtacctgagccggtcgccgaagtggtcgacctgccgtgggaagagcctgccgttgcc
cccgcgccgttagcggctgaacctgcgcctgaaccggcacctgcgcccgagcctgttgcc
ccggtggcgcccacacaggccgccccggcacacgacgagccgcctttcgacccgtctgcc
tacgctgccgtggggatggagcgcgacgatgagccgccgcttgacgaagactattacggt
ggcgaaagcgatccggcaggtttcagctacctggacgaattggccgaacatgttcaggaa
gacgtgtccaaaccggctgccgaaccgttgccggcagccaaaccggccaccggcctggcc
ttgcaatggctggaattattcccacagttgcctgtgtccgggatgacaggcaacatcgcg
gcaaactgtacgctgattgccgccgatggcgacgactggttgctgcacctggaccctggc
cagggggcgctgttcaacgccacccagcagcggcgcctgaacgaagcgctcaaccagcac
ctggggcgcacgctgaacctgcgcatcgagctgatcctgccagagcaggaaaccccggct
caggcggcggcacgcaagcgagccgagcgccagcaggacgccgtcgcgtcgatcgagcag
gatccgttgatccagcagatgatcaagttgttcggcgccaaggtgcggcaggatactatt
gagcctgtagaagccctggctagtcagggccagtaa
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