Pseudomonas putida KT2440: PP_4341
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Entry
PP_4341 CDS
T00114
Symbol
fliA
Name
(GenBank) RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu02020
Two-component system
ppu02025
Biofilm formation - Pseudomonas aeruginosa
ppu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP_4341 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PP_4341 (fliA)
09142 Cell motility
02040 Flagellar assembly
PP_4341 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppu03021
]
PP_4341 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppu02035
]
PP_4341 (fliA)
Transcription machinery [BR:
ppu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PP_4341 (fliA)
Bacterial motility proteins [BR:
ppu02035
]
Flagellar system
Flagellar assembly proteins
Stator
PP_4341 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
GerE
MarR_2
Ketoacyl-synt_2
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AAN69920
UniProt:
Q88EW1
LinkDB
All DBs
Position
complement(4931477..4932217)
Genome browser
AA seq
246 aa
AA seq
DB search
MNASGFKMYSRAAKDAQYELIERYAPLVKRIAYHLLARLPANVQVEDLIQAGMIGLLEVA
NKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAMRAVEARTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASGQVEPARGLEEE
RFQAALTEAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRSRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggcttcaagatgtacagccgggcggcgaaggacgcccagtacgagctg
atcgaacgctacgccccgctggtcaagcgcatcgcctaccacctgttggcgcgcttgccg
gccaacgtgcaggtcgaggacctgatccaggccggcatgatcggcctgctggaagtggcc
aacaaatacgacgccagcaagggcgccagctttgagacctacgccggcatccgcattcgc
ggggccatgctggacgaagtgcgcaaaggcgactgggcgccgcgttcggtacaccgcaac
acccgtatggtcagtgatgccatgcgtgcggttgaagccagaacaggccgtgacgctaaa
gatcatgaagttgctgccgaactccaattgagtctcgatgattactacgggatcttgaac
gataccctgggcagccgcctgttcagctttgacgacctgttgcaggacggcgagcacgaa
ggactgcatgaggatggcgccagtggccaggtcgaacctgcgcgcggcctggaggaggag
cgcttccaggctgccctgaccgaggccatcgccaacctgccggagcgtgagcgcctggtg
ctggcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaggtgctgggtgtc
agcgagtcgcgggtcagccagttgcacagccaatgtgccgcgcgcctgcgcagccgcctg
ggggaatggcgggcgcgttga
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