Pseudomonas putida KT2440: PP_4422
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Entry
PP_4422 CDS
T00114
Symbol
gabD-II
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP+)
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00250
Alanine, aspartate and glutamate metabolism
ppu00310
Lysine degradation
ppu00350
Tyrosine metabolism
ppu00650
Butanoate metabolism
ppu00760
Nicotinate and nicotinamide metabolism
ppu01100
Metabolic pathways
ppu01120
Microbial metabolism in diverse environments
Module
ppu_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PP_4422 (gabD-II)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PP_4422 (gabD-II)
00310 Lysine degradation
PP_4422 (gabD-II)
00350 Tyrosine metabolism
PP_4422 (gabD-II)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PP_4422 (gabD-II)
Enzymes [BR:
ppu01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
PP_4422 (gabD-II)
1.2.1.20 glutarate-semialdehyde dehydrogenase
PP_4422 (gabD-II)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
PP_4422 (gabD-II)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AAN69999
UniProt:
Q88EN2
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All DBs
Position
complement(5017384..5018856)
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AA seq
490 aa
AA seq
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MKDLAPSALNKLRRNDLLETRAYIDGRWVTGEGSLDVTDPANDQVIAQVAHCDESWVDLA
VEAASRAFDGWRNTLPTQRGAVLRKWAALMRENQEDLAVIMTCEQGKPLSESRGEINYGA
NFVEWFAAEGERCYGETIPSHLPNSQLVTKLQPIGVTVAITPWNFPSAMITRKAAAALAA
GCPMIVKPAPETPLSALALARLAEEAGIPGGVFQVLTGDAPKMSARLLAASAVRAFSFTG
STEVGRILLRQSADTVKKVSLELGGHAPFIVFDDASIAEAVEGCIGAKFATSGQDCLGAN
RIYVHRNIYGQFVEEFTKATEKLRVGHGLEEGVDIGPMTRVTVANKCREQISNALSLGAK
LTCGGIDNHLGSSFVLPTVLADVTDKMDIAFEETFGPVAAILPFDSEDEVVTRANNTEFG
LAAYVYTNDLRRACRVSDRLEYGMVALNTPKFTGAPIPFGGWKQSGLGREGSKHGLAEYM
ELKYVCIGGL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcttgcgccctccgccctcaataagcttcgtcgaaatgacctgcttgaaact
cgggcttacattgatgggcgctgggttactggcgagggctcgctcgacgtcactgatcca
gctaatgaccaggtgatcgcgcaggtagcccattgcgacgagtcctgggtagatctggcc
gtcgaagccgcttcgcgtgccttcgatggttggcggaacaccttgccgacacagcgtggt
gcagtccttcgtaaatgggcagcactgatgcgtgagaaccaagaagatttggcggtcatc
atgacctgcgagcaaggtaagccgctcagcgaatcacgcggagagatcaattacggcgcg
aactttgtcgagtggtttgcggcagaaggtgagcgttgctacggcgagacaattccaagt
catctcccgaacagccagttggtcactaagctgcagccgattggtgtaaccgtggccatc
acgccctggaacttccccagcgccatgatcacccgcaaggctgctgctgcactggcggct
ggatgcccgatgatcgtcaagccggcgcctgaaactccgctgtctgccctggctctcgcc
cggttggctgaagaagctggtattcctggtggtgtgttccaggtgctgaccggggatgca
ccgaagatgtcggctcgtctcttggccgcctccgcagtccgtgcgttcagtttcaccggt
tccacagaggttggtcggattctgctgcgtcagtctgcggatacggtcaagaaagtatcc
cttgaactgggtggccatgctccgttcattgtcttcgatgatgcctcgattgctgaggct
gtcgaaggctgcattggcgccaagttcgcaacctcaggtcaagattgcctgggcgcgaat
cgcatctatgtgcatcgcaacatctacggtcaattcgtagaggaattcaccaaggccacc
gagaagttacgcgttggccatggccttgaagagggcgtcgatatcggcccaatgactagg
gtaacggttgccaacaagtgccgagagcagatttcgaatgctctctcgctgggtgcaaaa
ctcacctgcggcggtatcgacaatcacttgggtagcagcttcgtccttccgactgttctg
gctgacgtcacggacaaaatggacatcgctttcgaagagaccttcggccccgtggcggca
atcctgcccttcgattccgaagatgaagtagtgaccagggccaacaacaccgagttcggc
ctcgctgcctacgtgtacaccaacgaccttcgtcgtgcctgccgagtatctgaccgactc
gagtacggcatggtcgcactcaacactccgaagttcaccggcgcaccaatcccgtttggc
ggctggaagcaatcgggcttgggccgtgaaggctcgaagcacggtttggctgagtacatg
gaactgaaatacgtctgcatcggcggtctgtaa
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