Pseudomonas putida KT2440: PP_4550
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Entry
PP_4550 CDS
T00114
Symbol
fadD-II
Name
(GenBank) long-chain-fatty-acid/CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00061
Fatty acid biosynthesis
ppu00071
Fatty acid degradation
ppu01100
Metabolic pathways
ppu01212
Fatty acid metabolism
ppu02024
Quorum sensing
ppu04146
Peroxisome
Module
ppu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PP_4550 (fadD-II)
00071 Fatty acid degradation
PP_4550 (fadD-II)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PP_4550 (fadD-II)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PP_4550 (fadD-II)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppu01004
]
PP_4550 (fadD-II)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppu04147
]
PP_4550 (fadD-II)
Enzymes [BR:
ppu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PP_4550 (fadD-II)
Lipid biosynthesis proteins [BR:
ppu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PP_4550 (fadD-II)
Exosome [BR:
ppu04147
]
Exosomal proteins
Exosomal proteins of breast milk
PP_4550 (fadD-II)
Exosomal proteins of breast cancer cells
PP_4550 (fadD-II)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AAN70123
UniProt:
Q88EB6
LinkDB
All DBs
Position
complement(5173291..5174979)
Genome browser
AA seq
562 aa
AA seq
DB search
MQADFWNDKRPAGVPSTIDINAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSA
AFAAWLQQHTDLKPGERIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKD
SGARALVYLNMFGKRVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKLKKMVPAYR
LPQAVPFKQVLREGRGLSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVL
ACFSQHGPDGQKLLKDGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFI
KELGKWRFSALLGLNTLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWEDLTGCR
IVEGYGLTETSPVASTNPYGQLARLGTVGIPVAGTAFKVIDDDGNELPLGERGELCIKGP
QVMKGYWQQPEATAQALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIE
DVVMGHPKVANCAAIGVPDERSGEAVKLFVVPREGGLSVDELKAYCKANFTGYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgacttctggaatgacaagcgcccggcaggcgtgccttccaccatcgacatc
aatgcctacgcctcggtcgtcgaggtgttcgagcgctcctgcaagcgctttgccgaccgc
ccggcgttcagcaacctgggcgtgaccctcagctacgcggaactggagcgccattcggca
gccttcgctgcctggttgcagcagcacaccgacctcaaaccgggtgagcgcatcgccgta
cagatgcccaatgtgctgcagtaccccatcgccgtcttcggtgccatgcgcgccgggctg
atcgtggtcaataccaacccgctgtacaccgagcgcgagatgcgccaccagttcaaggac
agtggcgcgcgtgcgctggtgtacctgaacatgttcggcaagcgcgtgcaggaggtgctg
cccgataccggtatcgaatacctgatcgaggcaaagatgggtgacctgctgccggccgcc
aagggctggctggtcaacaccgtggtcgacaagttgaagaagatggtgccggcctaccgg
ttgccccaggcggtgccgttcaagcaggtgctgcgcgagggccgcgggctgtcgcccaaa
ccggtgtcgctgaacctcgatgacatcgcggtgctgcagtacaccggcggcaccaccggc
ctggccaagggcgccatgctcacccatggcaacctggtggccaacatgctgcaagtgctg
gcctgcttctcgcagcacggccccgatgggcagaagctgctgaaggacggccaggaagtg
atgattgcgccgctgccgctgtaccacatctatgccttcaccgcgaactgcatgtgcatg
atggtcaccggcaaccataatgtgctgattaccaacccgcgggatattcccggcttcatc
aaggagctgggcaagtggcgtttctctgccttgctgggcctcaataccctgtttgtcgca
ctgatggaccacccgggattccgtcagctggacttctcggcgctgaaggtcaccaactct
ggtggcacagcgctggtcaaagccaccgccgagcgctgggaagaccttaccgggtgccgc
atcgttgaaggctacggcctgacagaaacctcgccggtggccagcactaacccctacggc
cagctggcgcgtctgggtaccgtgggcatccccgtggcgggtaccgcgttcaaggtcatc
gatgatgatggcaacgaactgccgctgggcgagcggggcgagctttgcatcaaaggcccg
caggtcatgaaggggtactggcagcagcccgaggcaacggcccaggcactggatgcagaa
ggctggttcaagaccggtgatatcgcggtgatcgacccggacggcttcacccgaattgtc
gaccgcaagaaggacatgatcatcgtctcgggcttcaacgtgtaccccaacgaaatcgag
gatgtggtgatggggcatcccaaggtcgccaactgtgcggctatcggcgtgccggacgag
cgttccggcgaggcggtcaagctgttcgtggtgccgcgcgagggggggctgagcgttgat
gagctgaaggcctactgcaaggccaacttcaccggctacaaagtacccaagcacatcgtg
ctgcgcgaatcgttgcccatgacgccggtgggcaagattttgcggcgggagttgcgcgat
atagcgtga
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