KEGG   Pseudomonas putida KT2440: PP_4654
Entry
PP_4654           CDS       T00114                                 
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
ppu  Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppu03016]
    PP_4654 (trmA)
Enzymes [BR:ppu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     PP_4654 (trmA)
Transfer RNA biogenesis [BR:ppu03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    PP_4654 (trmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 Methyltransf_4 Methyltransf_11 Cons_hypoth95 Methyltransf_12 MTS RrnaAD DREV pP_pnuc_1 Methyltransf_15 TRM5-TYW2_MTfase PrmA Ubie_methyltran Trp_halogenase
Other DBs
NCBI-ProteinID: AAN70227
UniProt: Q88E14
LinkDB
Position
5279782..5280867
AA seq 361 aa
MSAAFDPSSYATQLDAKVARLRELLAPFGAPEPAVFDSPREHYRLRAEFRLWREDGQRHY
AMFAPGEKHKAILIDDFPIASERINALMPRLKAAWQASEELGNRLFQVEFLTTLAGDAMI
TMCYHRPLDEAWEVEARQLAEALGVSVIGRSKGKRLVIGRDYAVEKLDVAGRVFSYRQPE
GAFTQPNGAVNQKMLSWAFEAIGEREDDLLELYCGNGNFTLPLATRVRQVLATEISKTSV
NAALSNLDENAVDNVRLVRLSAEELTQALNEVRPFRRLEGIDLKSYQFGTVFVDPPRAGM
DPDTCELTRRFERILYISCNPETLAANIAQLQDTHRIERCALFDQFPYTHHMESGVLLVR
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagtgctgctttcgacccctcctcctacgccacccagctggatgccaaagtggcccgg
ctgcgcgagctgctggcaccgttcggcgcgccggaaccggctgttttcgactcaccgcgc
gagcattaccgcctgcgcgccgagttccgcctgtggcgcgaggatggccagcgccactac
gccatgttcgccccgggcgagaagcacaaggcaatcctgatcgacgatttccccattgcc
agcgaacgcatcaacgcgttgatgccgcgcctgaaggcagcctggcaggccagcgaagaa
ctgggcaaccgcctgttccaggtggagttcctcaccaccctggctggcgatgcgatgatc
acgatgtgctatcaccgcccgctggacgaggcctgggaagtggaagcacggcaactggct
gaagcgctgggggtgagcgtcatcggccgctccaagggcaagcgcctggttatcggccgc
gactacgcggtggaaaagcttgatgtggctggccgcgtgttcagttaccgccagccggag
ggtgcgttcacccagcccaacggcgcagtgaaccagaagatgctcagctgggccttcgag
gccattggcgagcgtgaggatgacctgctggagctgtattgcggcaacggcaacttcacc
ctgccgctggccacgcgtgtacgccaggtgctggccaccgaaatcagcaagacgtcggtc
aatgccgccctgagcaaccttgacgaaaacgctgtggataacgtgcggctggtacgtttg
tcggcagaggagctgacccaggcactgaatgaggtgcggccgttccgtcgcctggaaggc
atcgacctgaagagttatcagttcggtaccgtgttcgtcgacccaccgcgtgcggggatg
gacccggatacctgcgagctgacccggcgtttcgagcgcattctgtacatctcgtgcaac
ccggaaacgctggcagcgaacattgcccagttgcaggacacccaccgcatcgagcgctgt
gcattgtttgaccagttcccgtatacccaccatatggagagtggggttctgctggttcgg
cgctga

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