Pseudomonas putida KT2440: PP_4683
Help
Entry
PP_4683 CDS
T00114
Symbol
mrcB
Name
(GenBank) transglycosylase/transpeptidase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00550
Peptidoglycan biosynthesis
ppu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PP_4683 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppu01003
]
PP_4683 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppu01011
]
PP_4683 (mrcB)
Enzymes [BR:
ppu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PP_4683 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PP_4683 (mrcB)
Glycosyltransferases [BR:
ppu01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PP_4683 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppu01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PP_4683 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP1_TM
Motif
Other DBs
NCBI-ProteinID:
AAN70256
UniProt:
Q88DY5
LinkDB
All DBs
Position
complement(5320930..5323251)
Genome browser
AA seq
773 aa
AA seq
DB search
MTRTRNPRTPQKRPTGRSRAWLGWALKLSLVGLVIVAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFTGQKLSKNDFLTELDALGYRRESAANGPGAASVNGNTVDLNTRGFQFYEG
MEPAQFVRVRFSGDYVAGLSGANGKALDVVRLEPLMIGGIYPKNLEDRILIKIDQVPKYL
LETLVATEDREFYSHFGVSPKSIVRAMWVNTSSGSMRQGGSTLTQQLVKNFYLSSERSLS
RKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQFFFSQPLSELKLH
QIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVASQAEVDAAKKMPLGVTKRG
SLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKAETSMSETFKRLAGR
KGADDVEAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALEQP
SKYTLTSWVQDEPFSVKGADGQVWRPQNYDRRPHGTIYLYQGLANSYNLSTAKLGLEVGV
PNVIKTIGRLGVNVDWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQTFDPGAIYLVQNAMQRVMREGTGRSVYNTLPRSLTLAGKTGTSNDSR
DSWFSGFSQDLLAVVWMGRDDNGKTPFTGATGALQVWTSFMKKADPLPLDMPQPDNVVQA
WIDPYSGHGSDASCPGAVQMPYIRGSEPPAGAACGGEQDPVESVMDWVKGWMN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaacccgaaatccccgcacccctcagaaacgcccgaccggccgctcccgcgcc
tggctgggctgggctttgaagctcagcctggttggcctggtgatcgttgccggcttcgcg
gtttacctcgatgccgtcgtccaggaaaagttctccggcaagcgctggaccatcccggcc
aaagtgtatgcccgaccgctggagctgttcaccggccagaagttgagcaagaacgacttc
ctcaccgagctcgatgcgctcggctaccgtcgcgaaagcgcggccaacggcccgggcgct
gcgtccgtcaacggcaataccgtcgacctcaatacccgtggcttccagttctacgagggc
atggaaccggcgcagttcgtccgcgtgcgcttctctggcgattacgttgcgggcctttcc
ggtgccaacggcaaggcgcttgacgtggtgcggctggagccgctgatgatcggcggcatc
tacccgaaaaatctcgaagaccgcatcctgatcaagatcgatcaggtacccaaatatctg
ctcgaaaccttggtggcaacggaggaccgcgagttctacagccacttcggcgtgtcgcca
aagtccatcgtccgggccatgtgggtcaacacgtcgtccggctcgatgcgccagggtggc
agtaccctgacccagcagttggtgaagaacttctacctcagcagcgagcgcagcctcagc
cgcaagctgaccgaggcgatgatggcggtcctgctcgaactgcactacgacaaacgcgaa
atccttgaggcctacctcaacgaggtgttcgtcggccaggacggtcagcgcgcggtgcac
ggctttggtctggctagccagttcttcttcagccagccgctgtccgagctgaaactgcat
cagatcgccctgctggtaggcatggtcaaaggcccgtcctactacaacccgcggcgtcac
cccgagcgggccctggctcgccgcaacctggtgctcgacctggtggccgagcagggcgtg
gccagccaggcagaagtcgatgcggcgaagaaaatgccgctgggcgtgaccaagcgtggc
agcctggccgacagctcgttcccagccttcctcgacctggtcaagcgacagttgcgccag
gattaccgcgacgaggacttgaccgaagaaggcctgcgcatctttaccagcttcgaccct
atcctgcagatgaaggccgaaacctcgatgagcgagaccttcaagcgcctggcgggccgc
aagggggcagacgatgtggaagcggcgatggtcgtgaccaaccctgagaccggtgaagta
caggcgctgatcggtagccgccaggcaggcttcgccggcttcaaccgggccatcgatgct
gtgcggccgatcggctcgttggtcaagccgtcggtatacctgactgcgctggagcagccg
agcaagtacaccctgaccagttgggtgcaggacgagccattttcggtcaagggcgctgac
ggccaagtctggcgcccgcaaaactatgaccgccgcccgcatggcacgatctacctgtac
caggggctggccaactcctacaacctgtcgaccgccaagctcggcctggaagtgggtgtg
ccgaacgtgatcaagaccatcggtcgcttgggcgtgaatgtcgactggcctgcattcccg
gccatgttgctgggggcaggtggcatgtcgccgatgcaggtggcaaccatgtaccagacc
atcgccaacggtggcttcaacacgccgatgcgcggcatccgcagcgtgctcaccgccgag
ggcgagccgctcaagcgctacccgttccagatccagcaaaccttcgacccaggtgccatt
tacctggtgcagaacgccatgcaacgcgtaatgcgcgaaggtacagggcgctcggtgtac
aacaccttgccacgctcgctgaccctggcgggcaagaccggtaccagtaacgactcgcgt
gacagctggttctccggcttcagtcaggatctgctggccgtggtgtggatggggcgtgac
gataacggcaagacaccgtttaccggcgccaccggcgccttgcaggtgtggaccagcttc
atgaagaaggccgacccgctgccgctggacatgccgcaaccggataacgtggtgcaggcc
tggatcgacccctacagtggccatgggtctgatgccagctgtccgggagcggtgcagatg
ccgtatattcgcgggagcgaaccgccggccggcgcagcctgtggcggcgagcaggaccca
gtagaatcggtaatggactgggtcaaaggctggatgaattaa
DBGET
integrated database retrieval system
