Pseudomonas putida KT2440: PP_4697
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Entry
PP_4697 CDS
T00114
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PP_4697 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppu03019
]
PP_4697 (pcnB)
Enzymes [BR:
ppu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PP_4697 (pcnB)
Messenger RNA biogenesis [BR:
ppu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PP_4697 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
BenE
Antitox_halo
Motif
Other DBs
NCBI-ProteinID:
AAN70270
UniProt:
Q88DX1
LinkDB
All DBs
Position
5338773..5340155
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AA seq
460 aa
AA seq
DB search
MLKKLFQSFRPPVPGPHHRRTTPEVINKSQHSLQRHQFSRHAVNIVERLQSAGYQAYLVG
GCVRDLMLGITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHVHFGREIIEVATFRAH
HSEDDQGDAHRSSHNASGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVH
DVRNRLLRLIGDPTHRYQEDPVRMLRAVRFAAKLDFGIEKHTYLPIRGLAPMLREIPPAR
LFEECLKLFLSGQGAIAFEMLVDLELFEPLFPASAHALDERPTYTHTLISQALNNTDLRV
KQGKPVTPAFLFAALLWPALPARVLHLQNQGVPPIPAMNGAAHDLIAEQCARIAIPKRFT
LPIREIWDMQERLPRRSGKRADMLLDNPRFRAGYDFLLLRESAGEETDELGQWWTDYQDA
NDSERREMIRELGSRDESAGPRKRKRSGSKRKRSGDEAFE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtctttccgcccgcccgtaccgggcccgcaccacaggcgc
accacgcccgaggtgatcaacaagagccagcactcgctgcagcgccaccagttcagccgt
catgcggtgaacatcgtggagcgcctgcaaagcgccggctaccaggcttacctggtcggt
ggctgtgtccgcgacctgatgctgggcatcacgccgaaggacttcgacgtcgccaccagc
gccacccccgaacaggtccgtgccgagttccgcaacgcccgcatcattggtcgtcgcttc
aaattggtccatgtgcatttcggccgtgagatcattgaagtcgccaccttccgcgcccac
cactccgaggacgaccagggcgatgcccaccgttcgtcgcataacgccagtggccgcatt
ctgcgagacaacgtgtacggcaccctggaagaggacgcgcaacgccgcgacttcaccatc
aacgccctgtactacgatccggtcagcgagcgcattctcgattacgccaacggtgtgcac
gacgtgcgcaatcgcctgctgcggctgatcggagacccgacccaccgctaccaggaagac
ccggtgcgcatgctgcgcgcggtgcgctttgctgccaagctcgactttggcatcgaaaag
cacacttacctgccgattcgcggcctggccccgatgctgcgcgagattccacccgcgcgc
ctgttcgaggaatgcctcaagctgttcctcagcggccaaggtgccatcgccttcgaaatg
ctggttgacctggagttgttcgaaccactgttcccggccagtgcccacgcgctggacgag
cggccgacctacacccacacgctgatcagccaggcactgaacaacaccgacctgcgcgtg
aagcagggcaagccggtgacgccagccttcctgtttgctgctctgctctggccagccctg
ccggcccgtgtgctgcacctgcagaaccagggcgtgccgccgatcccggccatgaacggt
gcggcccacgacctgatcgccgagcagtgcgcgcgcattgccatccccaagcgttttacc
ctgccgatccgcgagatctgggacatgcaggagcgcctgccgcgccgcagcggcaagcgc
gccgacatgctgctggacaacccgcgtttccgcgccggttacgacttcctgctgctgcgt
gaaagcgccggggaagaaaccgacgaactgggccagtggtggaccgattaccaggacgca
aacgacagcgagcgccgcgagatgatccgcgagcttggtagccgtgacgaaagtgccggc
ccgcgcaagcgcaagcgcagcggcagcaaacgcaagcgcagtggcgacgaggcgttcgag
tga
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