Pseudomonas putida KT2440: PP_4710
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Entry
PP_4710 CDS
T00114
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppu03016
]
PP_4710 (truB)
Enzymes [BR:
ppu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PP_4710 (truB)
Transfer RNA biogenesis [BR:
ppu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PP_4710 (truB)
Prokaryotic type
PP_4710 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
AMM03041
UniProt:
A0A140FWQ8
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All DBs
Position
complement(5354784..5355701)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTNTGDAEGEVLQTRDVTVGRADIEAVLPRFRGPIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTINRLELLECEGTRARLSVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEELEQAHAEGGNEALDRFLMPSDS
GLQDWPLVSLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaatgtcagcggcatcatcctgctcgacaagccg
ctgggcttcacgtccaatgccgccttgcagaaagtgcgttggctgctgaatgcggaaaag
gccggccataccggtagcctcgacccgctggcgaccggcgtgttgccgctgtgcttcggt
gaagcgaccaagttttcgcagtacttgctggattccgacaagggctacgaaaccgtcatg
cagatggggcagactaccaacaccggcgatgccgagggtgaggtgctgcagacccgcgac
gtgaccgttggtcgcgccgacatcgaagcagtgctgccacgttttcgcggcccgatcagc
cagataccgcctatgtactcggcgctcaagcgtgacggccagccgttgtacaagctggca
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattaaccgcttggagttg
ctcgagtgcgaaggcacccgtgcacggctgagcgtaggatgcagcaaaggcacctatatc
cgcacgctggtggaggatatcggtgaagcccttggttgcggggcctatgtcgccgagctg
cgcaggacccaggcagggccctttgcgctggcacagacggtcaccctcgaggaactcgaa
caggcccatgccgaaggtggtaacgaagcgctcgaccgcttcctgatgccgtcggacagc
gggctgcaggactggccgttggtcagcctgtcggaacacagtgcgttctactggctgcat
ggccaggcggtacgcgcgccggacgcgccacaatttggcatggttcgggtgcaggatcac
aatgcacgcttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccgcgtcgg
ctgattcggtcggaatga
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