KEGG   Pseudomonas putida KT2440: PP_4740
Entry
PP_4740           CDS       T00114                                 
Symbol
hsdR
Name
(GenBank) Type I restriction enzyme EcoAI R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ppu  Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppu02048]
    PP_4740 (hsdR)
Enzymes [BR:ppu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PP_4740 (hsdR)
Prokaryotic defense system [BR:ppu02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PP_4740 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N HSDR_N_2 T1RK_2nd Helicase_C Mt_ATP_synt AAA_11 nSTAND_NTPase5 DUF2726 SLFN-g3_helicase AAA_34 AAA_19 Turandot PhoH DUF87
Other DBs
NCBI-ProteinID: AAN70312
UniProt: Q88DS9
LinkDB
Position
5393059..5395422
AA seq 787 aa
MDKKSLSERDICSKYIAPAIQHAGWDMHKQVREEVSFTKGRIMVRGKLHSRGEARRADFI
LYHQANLPIAVIEAKDNKHSVGSGMQQALGYAEALDVPFVFSSNGDGFLFHDRSGTDSKV
ETELSLDQFPSPAELWHRYCQWKGLDNAVQHKIEAPYYDDGSGRMPRYYQMNAINRTVEA
VARGQDRVLLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADRNILVDQTKNNDFKPFG
QAMTKIARRQIDTSYEIYLSLYQAVTGAEEEMNVYKQFSRDFFDLIVIDECHRGSAAEDS
AWREILGYFSNATHVGLTATPKETKEVSSITYFGEPVYSYTLKQGIEDGFLAPYKVVRID
FDKDLQGWRPPKGMLDKNGELIEDRIYNLKDMDRTLVIETRTQLVAQKVTEFLKASDPFQ
KTIVFCDDINHAERMRQALVNLNPERVAENRKYVMRITGDDQEGKAELDNFINPEERYPV
IATTSKLMTTGVDAQTCKLIVLDQHIKSMTEFKQIIGRGTRINEDFGKYWFTIMDFKKAT
ELFADPAFDGDPVVVYAPEGNELPVPPDDLLEGDGISAGSDGESDDLDFTGEEDGKKLIK
YVIDSIPIYVIAERVQYYGPDGRLITESLHDYTRTCVQKQFASLDDFLRHWSDAEQKKVI
IDEMAAQGVMWEALAEEVEKKQGKPLDPFDLICHVAFDQPPLSRKERAEQVKKRNYFAKY
SGAARQVLEALLDKYADTGIEHIEDIKILQLDPFNQLGAPIELVKAFGGKAGYNKAIHEL
EDALYAS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggacaagaaatcactttccgagcgggacatctgcagcaaatacatcgctccagccatc
cagcacgctgggtgggacatgcacaaacaggtgcgtgaagaggtcagcttcaccaaaggc
cggattatggtccgtggcaagcttcacagccggggcgaagcacgccgtgcagacttcatc
ctctaccaccaagccaacctgcctatcgctgtgatcgaggcgaaggataacaagcactcc
gttggctccggcatgcagcaagcgcttggctatgcagaggcgttggatgtgccgttcgtg
ttctccagcaatggcgatggttttctctttcatgatcgcagtgggacagacagcaaggtc
gaaactgaactctccttggatcagttccctagtcctgccgaactttggcaccgctactgc
caatggaaggggttggacaatgctgttcaacacaagatagaagcgccctactacgacgac
ggctccggacgtatgccgcgctattaccaaatgaacgccatcaaccgcaccgttgaggcg
gtagcgcgcgggcaagaccgcgttctgctggtaatggcaactggcaccggaaaaacctac
accgcctttcaaatcatctggcgactgtggaaatcgaaacagaaaaaaagaatcctgttc
cttgccgaccgcaacatcctggtcgaccagacaaagaacaacgactttaagcccttcggc
caggcgatgaccaaaatcgccagacgccagatagacacctcctacgaaatctacctgtcg
ctctatcaggcggtgactggtgctgaagaagagatgaacgtctacaagcagttctcccgc
gacttcttcgacttgatcgtgatcgacgaatgccaccgtggcagcgccgccgaggactcc
gcctggcgcgagattcttggctacttctccaacgccacccatgtcggcctcaccgcaaca
ccgaaggaaaccaaagaggtgtccagcatcacctacttcggtgagccggtgtacagctac
accctcaaacagggcatcgaggacggttttctcgcgccctataaagtggtgcggatcgac
ttcgacaaagacctacaaggctggcgcccccccaagggtatgctcgacaagaatggcgag
ctgatcgaagaccgcatctacaacctcaaggacatggatcgcactctggtcatcgaaacg
cgcacccaactggtggcgcagaaggtcaccgagttcctcaaggcctccgacccgttccag
aaaaccatcgtcttctgcgacgatatcaatcacgccgagcgtatgcgccaggccttggtc
aacctgaaccccgagcgcgtggctgagaaccgcaagtacgtcatgcgcatcaccggcgat
gatcaggaaggcaaggccgagctggataacttcatcaacccggaagagcgctacccggtc
atcgccaccaccagcaagctgatgaccaccggtgtcgatgcgcagacttgcaagctgatc
gtgctcgaccagcacatcaagtcgatgaccgagttcaagcagatcatcggccgtggcacc
cgcatcaatgaagatttcggcaaatactggttcaccattatggacttcaagaaggccacc
gagctttttgccgacccagctttcgacggagacccagtggtggtctacgcccccgaaggc
aacgagctaccagtcccgcccgacgatttacttgaaggcgatggcatcagcgcagggagt
gatggagaaagcgatgatttggattttaccggcgaggaagacggcaagaagctcatcaaa
tacgtcatcgacagcatcccgatctatgtcatcgccgagcgtgtccagtactacgggccg
gatggccgactgatcaccgaatcgctgcacgactacacccgtacctgcgtgcaaaaacag
ttcgcctcgctggacgactttctgcgccattggagtgatgccgagcagaaaaaggtcatc
atcgacgaaatggcagcccaaggcgtgatgtgggaagccctggccgaagaagtggaaaag
aaacagggcaagccactcgatccgtttgacttgatctgccacgtcgcgttcgaccaaccg
ccgctgtcgcgtaaagaacgcgccgaacaagtgaaaaagcgtaactacttcgccaaatac
tccggtgcagcgcgccaggtgctggaagcgctgctggataaatacgccgacaccggcatt
gagcacatcgaggacatcaaaatcctccagctcgatccctttaaccagctcggtgcaccc
atcgaactggttaaagcctttggcggcaaagctggctacaacaaagctatccatgaactg
gaagacgcgctgtacgccagttaa

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