Pseudomonas putida KT2440: PP_4922
Help
Entry
PP_4922 CDS
T00114
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00730
Thiamine metabolism
ppu01100
Metabolic pathways
ppu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PP_4922 (thiC)
Enzymes [BR:
ppu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PP_4922 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AAN70489
UniProt:
Q88DA5
LinkDB
All DBs
Position
complement(5594198..5596078)
Genome browser
AA seq
626 aa
AA seq
DB search
MTKQEKAINLSESAQVDQQSVQPFPRSRKVYVEGSRPDIRVPMREISLDDTPTDFGGESN
APVLVYDTSGPYTDPDVIIDVRKGLPDVRSAWIEARGDTERLEGLSSDFGQQRLNDAELA
KLRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIRENMKLQEARAAGLLNEQHAG
HSFGANIPKEITPEFVRQEIARGRAIIPANINHPEVEPMIIGRNFLVKINGNIGNSALGS
SIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGVA
EDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHH
KENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKHD
VQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGW
FGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEF
RWEDQFNLGLDPDTARAFHDETLPKESAKVAHFCSMCGPKFCSMKITQEVREYAAKIEAV
DVTVEQGMREQAERFRQEGSQLYHKV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacaagaaaaagcgatcaacctcagcgaatcggcacaagtcgatcagcagtcc
gtgcaaccgttcccgcgttcgcgcaaggtgtatgtcgaaggctcgcgcccggacatccgt
gtccccatgcgtgaaatcagcctggatgacaccccgaccgatttcggcggcgagtccaac
gccccggtgctggtgtatgacacgtctggcccgtacaccgaccccgacgtgatcatcgac
gtgcgcaaaggcctgcccgatgtgcgttcggcgtggatcgaagcccgcggtgacaccgag
cgcctggaaggcctgagctccgacttcggtcagcagcgcctgaacgatgcagagctggcc
aagctgcgttttgcccatgtgcgcaacccgcgccgggccaaggccggcgccaacgtctcg
cagatgcactatgcccgtcagggcatcatcaccgccgaaatggaatacgtggccatccgc
gaaaacatgaagctacaggaggcccgcgctgccggcctgctgaatgagcaacatgccggc
cacagcttcggtgccaacatcccgaaagaaatcacccctgaattcgtccgccaggaaatc
gcccgtggccgcgcgatcattccggccaacatcaaccacccggaagtagagccgatgatc
atcggccgcaacttcctagtgaagatcaacggcaacatcggcaacagcgccctgggttcc
tcgatcgaggaagaggtggccaagctgacctggggcatccgctggggctcggacacggtc
atggacctgtccaccggcaagcacatccacgaaacccgcgagtggatcattcgcaactcg
ccggtgccgatcggtaccgtgccgatctaccaggccctggaaaaggtcaacggcgtggca
gaggacctgacctgggaactgttccgcgacaccctgatcgagcaggccgaacagggcgtg
gactacttcaccattcacgccggtgtgttgctgcgctatgtgcccctgaccgccaagcgg
gtcaccggcatcgtcagccgcggtggctcgatcatggccaagtggtgcctggcgcaccac
aaggaaaacttcctgtacacccacttcgacgaaatctgcgaaatcatgaaggcctacgac
gtcagcttctcgctgggcgacggcctgcgccctggctcgattgccgacgccaacgacgcc
gcgcaattcggtgagctggaaaccctcggcgagctgaccaagattgcctggaagcacgac
gtgcaatgcatgatcgaaggccccggccacgtgccgatgcaattgatcaaagagaacatg
gacaagcagctggagtgctgcgacgaggcgccgttctacaccctcggcccactgaccacc
gacatcgcgccgggttacgaccacatcacctcgggcattggtgcggcaatgatcggctgg
ttcggttgcgccatgctctgctacgtcacgccgaaggagcacctgggcctgccgaacaag
gacgacgtcaagaccggcatcatcacctacaagatcgccgcgcatgccgccgaccttgcc
aagggccacccgggtgcacagattcgcgacaatgccctgtccaaggcgcgtttcgagttc
cgttgggaagaccagttcaacctgggcctcgacccggacaccgcccgtgctttccacgac
gagaccctgccgaaggaatcggccaaggtcgcgcacttctgctcaatgtgcgggccgaag
ttctgctcgatgaagatcacccaggaagtgcgtgagtacgctgccaagatcgaggccgtg
gatgtgacggtcgagcaaggcatgcgtgagcaggccgagcggttccgccaggaaggcagc
cagctgtaccacaaagtctaa
DBGET
integrated database retrieval system
