Pseudomonas putida KT2440: PP_5108
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Entry
PP_5108 CDS
T00114
Symbol
rpoH
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppu03021
]
PP_5108 (rpoH)
Transcription machinery [BR:
ppu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PP_5108 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
AAN70673
UniProt:
Q7CCA6
LinkDB
All DBs
Position
complement(5827997..5828851)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTVEQERDLGERLYYEQDVEAARQMVMAHLR
FVVHIARSYAGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLSGQD
MAFDPAAEADDDSAFQSPAHYLEDHRYDPAVQLEDADWSDNSTSNLHEALQGLDERSRDI
LYQRWLAEEKATLHELADKYSVSAERIRQLEKNAMNKVKALIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatcgttgcaacctgcctatgccctggtacccggtgcaaacctggaagcctat
gtgcacacggtcaacagcatcccgctgctgacggtcgagcaggagcgtgatctgggcgag
cgtctctattatgagcaggatgtcgaggccgctcgtcagatggtgatggcccacctgcgt
ttcgtcgtacatatcgcccgtagttatgccggctacgggttggcccaggctgacctgatc
caggaaggcaacgtcggcctgatgaaagccgtcaagcgcttcaacccggaaatgggcgtg
cgcctggtgtcgttcgccgtgcactggatcaaggcagagatccacgagttcattctgcgc
aactggcgcatcgtcaaggtggctaccaccaaggctcagcgcaagctgttcttcaacctg
cgtagccagaagaagcgcctggcgtggctgaacaacgacgaagtgcatcgcgtggcggaa
agccttggcgtcgagccgcgcgaagtgcgcgagatggaaagccgcctcagcggccaggac
atggcctttgacccggcagcggaagctgacgacgacagcgccttccagtcgcctgcgcat
tacctggaagaccaccgttacgatccggcggtgcagcttgaggatgccgactggagtgac
aactccaccagcaacctgcacgaagcgctgcagggcctggacgagcgtagccgcgacatt
ctctaccagcgttggctggcggaagagaaggccacgctgcatgaactggcagacaagtac
agcgtatcggctgagcgtattcgccagttggagaagaatgcgatgaacaaggtcaaggca
ctgatcgctgcctga
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integrated database retrieval system
