Pseudomonas putida KT2440: PP_5127
Help
Entry
PP_5127 CDS
T00114
Symbol
rlmI
Name
(GenBank) ribosomal RNA large subunit methyltransferase I
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppu03009
]
PP_5127 (rlmI)
Enzymes [BR:
ppu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
PP_5127 (rlmI)
Ribosome biogenesis [BR:
ppu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PP_5127 (rlmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_15
Methyltransf_31
MTS
Methyltransf_25
TRM5-TYW2_MTfase
UPF0020
FtsJ
PrmA
Methyltr_RsmB-F
Spermine_synth
Methyltransf_24
Anamorsin_N
MT-A70
TRM
DUF429
Motif
Other DBs
NCBI-ProteinID:
AAN70692
UniProt:
Q88CQ3
LinkDB
All DBs
Position
5847829..5849025
Genome browser
AA seq
398 aa
AA seq
DB search
MSLPSLRLKANADRRLRAGHLWVYSNEVDVSATPLQGFQAGQQAILEAANGKPLGIVALS
PNNLICARLLSRDIKLPLDKSLLVHRLNVALSLRERLFEQPCYRLVYGDSDLLPGLVVDR
FFDILVVQLASATMEAHKDDVIAALVQVLKPSGILFKNDSAARDAEGLQRYVETVYGEVP
DWVPLEENGVKFEAPVREGQKTGWFYDHRMNRARLAPYVKGKRVLDLFSYIGGWGVQAGA
FGASEVFCVDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADP
PAFIKRKKDLKNGEAAYRRLNEQAMRMLNKDGILVSASCSMHLPEDDLNNILLTSARHLD
RNMQLLERGGQGPDHPVHPAIAETRYIKSITCRLLPNS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcccagccttcgcctcaaagccaatgccgaccgccgcctgcgcgccggccac
ctgtgggtctacagcaacgaagtcgatgtcagcgcgacccctttgcaaggcttccaggcg
ggccagcaggccattctcgaggcagccaacggcaagccgctgggcatcgtcgcgctgagt
ccgaacaacctgatctgcgcccgcctgctgtcacgcgacatcaagctgccgctggacaag
tcgctgctggtacaccgcctgaacgtcgccctgtcgctgcgcgagcgcctgttcgagcag
ccgtgctaccgcctggtctacggtgactccgacctgctcccaggcctggtggtcgaccgt
ttcttcgatatcctcgtggtgcagttggcctcggccaccatggaagcgcacaaggatgac
gtgatcgccgcactggtgcaggtgctcaagcccagcggcatcctgttcaagaacgattcg
gccgcgcgcgacgccgaaggcctgcagcgctatgtcgagaccgtctacggcgaagtgccg
gactgggtgccgctggaagagaacggcgtcaagttcgaagctccggtgcgcgaaggccag
aagacgggctggttctacgaccaccgcatgaaccgcgcccgcctggcaccgtacgtgaag
ggcaagcgtgtactcgacctgttcagctacatcggcggctggggcgtgcaggccggtgcc
ttcggcgccagcgaagtgttctgcgtcgatgcctcgggctttgccctggacggcgtggag
cgtaacgctgcactgaacggcatcagcgagaagctgacctgcatcgaaggcgacgtgttc
gaagccctgcgagagctcaaggcggccgaagaacgcttcgacgtgatcattgccgaccca
cctgccttcatcaagcgcaagaaggacctgaaaaacggcgaagcggcctaccgccgcctg
aacgaacaggccatgcgcatgttgaacaaagacggcatcctcgtcagcgcctcgtgctcg
atgcacctgcccgaggacgacctgaacaacatcctgctgaccagtgcccgccacctggac
cgcaacatgcagctgctcgagcgaggcggtcagggcccggatcacccggtacacccggcc
atcgccgaaacccgctacatcaaaagcatcacctgccggttactgccaaacagctga
DBGET
integrated database retrieval system
