Pseudomonas putida DLL-E4: DW66_0572
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Entry
DW66_0572 CDS
T03439
Name
(GenBank) GAF modulated sigma-54 specific transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppud
Pseudomonas putida DLL-E4
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppud03000
]
DW66_0572
Transcription factors [BR:
ppud03000
]
Prokaryotic type
Helix-turn-helix
Other families
DW66_0572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_23
HTH_17
HTH_30
AAA_2
AAA_5
HTH_29
AbiEi_4
HTH_50
HVO_A0261_N
HTH_28
AAA_16
HTH_22
RWP-RK
HTH_7
HTH_32
IclR_C
Motif
Other DBs
NCBI-ProteinID:
AHZ75095
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Position
619216..621069
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AA seq
617 aa
AA seq
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MLAANSRAHVDCVSRVLKNADRLPQAPVPPLILDSWRRSMELYRLDPGSQQGPRILSQSL
LNECRERAELFLRIASDAVARLHERVRGADYCVLLTDALGRTIDYRVESAIRNDCRKAGL
YLGTCWSEGEEGTCGVAAVLTSKAPVTVHKRDHFRAAFIGLTCTAAPVFDPLGELLGVVD
VSALQSPDDRRSQHLIRQLVEQTAREIENAFFMHSAQGHWVMRAHGTPGYVESQPDYLLA
WDGDGRLQAINSLARQRLVEHLGRLPEHIGELFDMDQLRRVNASSAQRLPGLGGLYGRVS
APRQRQRAQPLRQAQDARIEQHLRLATRVKDCNLAVLVQGETGAGKEVFARQLHQQSLRR
DGPFVTLNCAAIPESLIESELFGYVAGAFTGASSKGMQGLLQQADGGTLFLDEIGDMPLN
LQTRLLRVLAEGEVAPLGAARRERVDIQVICATHRDLAAMVEDGRFREDLYFRLANARFE
LPPLREREDRLGLIHQLLAEEAEACGVEVVLADDALQALLVYRWPGNLRQLRQVLRYACA
VSEDGRVQVQDLPQEVRGEVVASAESSMSCPARQLLLDALIRHRWKPADAARALGISRAT
LYRRVHEHHIEMPRMKG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgcgaactcccgagcccatgtcgactgcgtcagcagggtgctgaagaatgcc
gaccgcctgccgcaggcgccggtgccaccgctgatcctcgattcatggcgccgttccatg
gagctgtaccgcctcgaccccgggtcccagcaggggccgcgcatcctgtcccaaagcctg
ctcaacgaatgccgcgagcgcgctgaactgttcctgcgcatcgccagcgatgccgtggcc
cgcctgcatgagcgggtgcgcggtgccgactactgcgtgctgctcaccgacgccttgggg
cgcaccatcgattaccgggtcgagtcggccatccgcaacgattgccgaaaggccgggctg
tacctgggcacctgctggtcggagggcgaggagggcacctgcggcgtggcggcggtgttg
accagcaaggcgccggtcacggtgcacaagcgcgaccacttccgcgccgcgttcattggc
ctgacctgtacggcggcaccggtgttcgacccgctgggcgagttgctgggcgtggtggat
gtctcggccttgcagtcgccggacgaccgccgcagccagcacctgatccgccaattggtc
gagcagactgcgcgcgagatcgaaaatgccttcttcatgcacagtgcccagggccattgg
gtaatgcgtgcccatggcacgccgggctatgtggaaagccagcccgactacctgctggcc
tgggatggcgatggccgcctgcaggcgatcaacagcctggcgcgccagcgcctggtggag
catctggggcgtttgcccgagcacattggcgagctgttcgacatggatcagttgcgccgc
gtgaacgcatcgtccgctcaacgcctgccgggcctgggtggtctgtacggccgggtcagc
gcaccccgacagcgccagcgtgcgcagccgttgcgccaggcccaggacgcccgtatcgag
cagcatctgcgcctggccacgcgggtcaaggactgcaacctggcggtgcttgtgcaaggc
gagacgggggctggcaaagaggtgttcgcccgccagctgcatcagcaaagcctgcgtcgc
gatggcccgttcgtcaccttgaactgcgcggccatcccggaaagcctgatcgagagcgag
ctgttcggctatgtggccggggccttcaccggggcttccagcaaaggtatgcaggggctg
ttgcagcaggccgatggcggcacgctgttcctcgacgaaatcggtgacatgccgctgaac
ctgcaaacccggttgctgcgcgtgctggcggagggtgaagtggcgccgctgggcgcggcg
cggcgggagcgggtggatattcaggtgatttgcgcgacccaccgcgatttggcggcgatg
gtggaggatgggcgttttcgtgaggacctgtacttccgcctggccaatgcccgcttcgag
ttgccgccgctgcgcgagcgtgaggaccgcttggggttgattcaccagttgctggccgag
gaagccgaggcctgcggagtcgaggtggtgttggcggatgatgcgctgcaggcgctgctg
gtttaccgctggccggggaatttacgccagctgcggcaggtgttgcgctatgcctgtgcg
gtgagcgaggacgggcgggtgcaggtgcaggacctgccgcaggaggtgcgcggcgaggtg
gtcgcttcggcagaaagcagcatgtcttgtccggcccggcagttgctgctggatgcgctg
atccgccatcgctggaagccggccgatgcggcgcgggctctgggaatatcgcgggcaacc
ttgtaccggcgggtgcatgagcaccacatcgagatgccgcggatgaaggggtag
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