Pseudomonas putida DLL-E4: DW66_1953
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Entry
DW66_1953 CDS
T03439
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
ppud
Pseudomonas putida DLL-E4
Pathway
ppud00550
Peptidoglycan biosynthesis
ppud01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DW66_1953
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppud01002
]
DW66_1953
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppud01011
]
DW66_1953
Enzymes [BR:
ppud01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DW66_1953
Peptidases and inhibitors [BR:
ppud01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
DW66_1953
Peptidoglycan biosynthesis and degradation proteins [BR:
ppud01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DW66_1953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AHZ76471
UniProt:
A0A059UR33
LinkDB
All DBs
Position
complement(2127591..2129048)
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AA seq
485 aa
AA seq
DB search
MIKTLRPLVLAGLLLPLALPSQAAAVNTTLPAKVQQALKANKLQDSALSLVMLPLDGPGT
PTVFNADVSVNPASTMKLVTTYAALELLGPTFQWKTEFYTDGTLSNGVLNGNLYLKGGGD
PKLNMEKLWLLMRDLRANGVRTITGDLVLDRSHFVQPNLPQFNDDGGDENKPFLVKPDSL
LVNLKALRFVARNDGGKVTIAVEPPIASIRIDNQVKAVASRQCSGDVRYNPVQQADGISV
TVSGQLGDGCNSQTYLSLLDHQTYAAGAVRAIWNELGGSIQGGDRFENVPKGARLLARAF
SPDLVEVIRDINKYSNNTMAQQLFLSLGAQFRTDADGDDARAAQRVVRQWLAKKGITAPH
LVMENGSGLSRAERVSTREMAAMLQAAWKSPYAAEFMSSMPLVGMDGTMRKRLKRTAMTG
EGHIKTGTLNTVRAIAGFSRDSNGHTWAVAAILNDPKPWGASQVLDQVLLDLYRQPKLAG
STAAN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacgcttcgtcccctcgttcttgccggcctgctgttgccactcgccctgccc
agccaggccgccgccgtcaacaccacgctgcctgccaaggtgcagcaggccctcaaggcc
aacaagctgcaggattctgccctgtcgctggtgatgctgccgctggacggccccggcaca
ccgaccgtgttcaatgccgatgtctcggtcaacccggcctcgaccatgaaactggtcacc
acctacgccgccctcgaactgctcggcccgaccttccagtggaaaaccgagttctacacc
gacggcaccctgagcaacggtgtactcaacggcaacctgtacctcaagggtggcggcgac
ccgaaactgaacatggaaaagctgtggctgctgatgcgtgacctgcgcgccaatggcgtg
cgcaccatcaccggcgacctggtgctggaccgcagccacttcgtgcagcccaacctgccg
cagttcaacgacgacggtggcgatgagaacaagccgttcctagtcaagcccgactcgctg
ctggtcaacctcaaggccctgcgtttcgtggcccgcaacgatggcggcaaggtaaccatc
gcagtcgaaccgccgattgccagcatccgtatcgacaaccaggtcaaggcagtagcctcc
agacagtgctcgggtgacgtgcgctacaacccggtgcagcaggccgatggcatcagcgta
acggtcagtggtcagctgggtgacggctgcaactcccagacctatctgtcgctgctcgac
caccagacctacgccgccggtgccgtgcgcgcgatctggaacgagctgggtggcagcatc
cagggtggcgaccgcttcgagaacgtgcccaagggcgctcgcctgctggcccgagccttc
tcgccagacctggtggaagtgatccgcgacatcaacaagtacagcaacaacaccatggcc
cagcagctgttcctgagccttggcgcgcagttccgcaccgatgccgacggtgacgacgcc
cgcgccgcccagcgtgtggtgcgccagtggctggcgaagaagggcattaccgcgccgcat
ctggtaatggaaaacggttccggcctgtcgcgtgccgaacgggtcagcacccgggagatg
gccgcgatgctgcaggccgcctggaagagcccttatgctgccgagttcatgagctcgatg
ccgctggtgggtatggatggcaccatgcgcaagcgcctgaagcgtaccgccatgaccggc
gaagggcacatcaagactggcacgctgaataccgtgcgggcaattgcaggcttcagccgc
gacagcaacggccatacctgggcggtggcggcgatcctcaacgatccgaaaccgtggggc
gcctcgcaggtgctcgaccaggtgctgctggacctgtaccgccagccgaaactggccggc
agtactgcggccaactga
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