Pseudomonas putida DLL-E4: DW66_1992
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Entry
DW66_1992 CDS
T03439
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppud
Pseudomonas putida DLL-E4
Pathway
ppud00071
Fatty acid degradation
ppud00280
Valine, leucine and isoleucine degradation
ppud00310
Lysine degradation
ppud00362
Benzoate degradation
ppud00380
Tryptophan metabolism
ppud00410
beta-Alanine metabolism
ppud00640
Propanoate metabolism
ppud00650
Butanoate metabolism
ppud00907
Pinene, camphor and geraniol degradation
ppud00930
Caprolactam degradation
ppud01100
Metabolic pathways
ppud01110
Biosynthesis of secondary metabolites
ppud01120
Microbial metabolism in diverse environments
ppud01200
Carbon metabolism
ppud01212
Fatty acid metabolism
Module
ppud_M00087
beta-Oxidation
ppud_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DW66_1992
00650 Butanoate metabolism
DW66_1992
09103 Lipid metabolism
00071 Fatty acid degradation
DW66_1992
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DW66_1992
00310 Lysine degradation
DW66_1992
00380 Tryptophan metabolism
DW66_1992
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DW66_1992
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DW66_1992
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DW66_1992
00930 Caprolactam degradation
DW66_1992
Enzymes [BR:
ppud01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DW66_1992
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DW66_1992
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DW66_1992
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
DW66_1992
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
SDH_protease
Motif
Other DBs
NCBI-ProteinID:
AHZ76510
LinkDB
All DBs
Position
2170759..2172906
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMSTSAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPQLLMAGALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEAQVK
DDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVADATVLDVLKPIVFEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgagctc
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgcctgaccctgaacgaactg
cgccaggccgtcgatgccatcaaggccgacgcctcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgaactggtcgccggcaacctggaagccaatcgcattttcaacgccttcgaa
gacctcgaagtgccgaccgtcgccgccatcaacggcatcgccctgggcggcggcctggaa
atgtgcctggccgccgactaccgggtcatgtccaccagcgccaagattggcctgccggaa
gtcaaactgggtatctacccgggcttcggcggtaccgtgcgcctgccgcgcctgatcggt
tcggacaacgccatcgaatggatcgccgccggcaaggaaaaccgtgccgaggacgccctg
aaagtgggtgccgtcgacgccgtggtcgcgcctcaactgctgatggccggtgcccttgac
ctggtcaagcgcgccatcagtggcgagctggactacaaggccaagcgccagcccaagctg
gaaaagctcaagctcaatgccatcgagcagatgatggccttcgagactgccaagggcttc
gtcgccggccaggccggccctaactacccagccccggtcgaagccatcaagaccatccag
aaggctgccaacttcggtcgtgacaaggccctggaagtggaagccgcaggcttcgccaag
ctggccaagacctcggttgccgaaagcctgatcggcctgttcctcaacgaccaggaactc
aagcgcaaggccaaggcgcatgacgaaatcgcccacgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggtggcggcatcgcctaccagtcggcggtcaagggcaccccgatc
ctgatgaaggatatccgcgaggaagccatccagctgggcctgaacgaggcctccaagctg
ctcggcaatcgcgtcgagaagggccgcctgaccccggccaagatggccgaggcactcaac
gccattcgcccgaccctgtcctatggcgatttcgccaatgtcgacatcgtcgtcgaggcc
gtggtcgaaaacccgaaagtcaagcaggccgtgctggctgaagtggaagcccaggtgaag
gacgatgcgatcctcgcttccaacacctcgaccatttccatcaacctgctggccaaggcg
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcatccgtggcgagaagtccagtgaagtggcggttgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttcgccaagctggtaagcgccggtgtcgac
ttcgtgcgtatcgacaaggtcatggaaaagttcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggccgcgacgtgatggccgaaggcttc
ccggaccgcatgaaggacgagcgccgctcggccgttgacgcactttacgaggccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgaaaccgacaagcgcggcaagccg
aagaaggtcgccgacgccaccgtgctcgacgtgctcaagccgatcgtcttcgagcagcgt
gaagtcaccgacgaagacatcatcaactggatgatgatcccgctgtgcctggagaccgtg
cgctgcctggaagacggcatcgtcgaaaccgctgccgaagccgacatgggcctggtctac
ggcattggcttccctcccttccgcggtggtgcgctgcgctacatcgactcgatcggtgtg
gccgaattcgttgccctggccgatcaatacgccgacctggggccgctgtaccacccgacc
gccaagctgcgtgaaatggccaagaacggccagcgcttcttcaactga
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