Pseudomonas putida DLL-E4: DW66_3906
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Entry
DW66_3906 CDS
T03439
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ppud
Pseudomonas putida DLL-E4
Pathway
ppud00500
Starch and sucrose metabolism
ppud01100
Metabolic pathways
ppud01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
DW66_3906
Enzymes [BR:
ppud01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
DW66_3906
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-ProteinID:
AHZ78411
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All DBs
Position
4249307..4251460
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AA seq
717 aa
AA seq
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MSPRTPKKTRSVAPSRIREGLPFPLGATWDGLGVNFALFSANATKVELCLFDSTGEHEIE
RIELPEYTDEIYHGYLPDAHPGLVYGYRVHGPYEPENGHRFNPNKLLIDPYAKQLVGSLQ
WSEALFGYTIGHPDGDLSFDERDSAPFVPKCKVIDPAFTWGRDQRVQIPWERTIIYEAHT
RGISMRHPAVPEELRGTFAGLANDELLKHIKELGVSSIELLPIHAFVNDQHLLDKGLNNY
WGYNSIAFFAPHPRYLASGKIAEFKEMVAHLHDAGLEVILDVVYNHTAEGNERGPTLSMR
GIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQLVTDSLRYWAGEMHVDGFRFDLA
TILGRYHDGYSERHGFLVACRQDPMLSQVKLIAEPWDCGPGGYQVGNFAPGWAEWNDRFR
DTVRAFWKGDEGQLADFASRMTASGDMFNNRGRRPYASVNFVTAHDGFTLRDLVSYNHKH
NEDNDENNQDGTDNNLSWNCGVEGPTDDPAVNALRMRQMRNYFATLLLAQGTPMIVAGDE
FSRTQHGNNNAYCQDSEIGWVNWDLDQEGKELLAFVKRLTRLRLAYPVLRRSRFLVGDYN
EAIGVKDVTWLAPDGNEMSVEQWEDPHGRCLGMLIDGRAQVSGIARPGAEATVLLIVNAH
HDIVPFQLPTVPEGDYWSCLVDTDRPELRKGQHLQFDSTFEVKGRSLLLMVLQRDEE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccgcaccccgaagaaaacccgctcggtcgccccgtcgcgtatccgcgaaggc
ctgcccttccccctcggcgccacctgggatggccttggggtcaactttgccctgttctcg
gccaatgccaccaaggtcgagctgtgcctgttcgactccaccggcgagcacgaaatcgaa
cgcatcgagctccccgaatacaccgacgagatctaccacggctacctgcctgacgctcac
ccagggctggtctacggctaccgcgtgcacggcccgtacgagccggagaacggccaccgc
ttcaaccccaacaaactgctgatcgacccgtatgccaagcaactggtcggcagcctgcaa
tggtccgaagcactgttcggctacaccatcggccaccccgacggcgatctgtcgttcgac
gagcgcgacagcgcgcccttcgtgcccaagtgcaaggtgatcgaccctgcattcacctgg
ggccgcgaccagcgcgtgcagatcccctgggagcgtacgatcatttatgaggcccacacc
cgtggcatcagcatgcgccacccagcggtgccggaagaactgcgcggcaccttcgccggc
ctggccaatgacgagttgctcaagcacatcaaggagctgggcgtttccagcatcgagctg
ctgccgattcacgccttcgtcaacgaccagcacctgctggacaagggcctgaacaactac
tggggctacaacagcatcgccttctttgcgccccacccgcgttacctggccagcggcaag
atcgccgagttcaaggaaatggtcgcacacctgcacgacgccgggctggaggtgatcctg
gatgtggtctacaaccacaccgccgaaggcaacgagcgcggccccacgctgtcgatgcgc
ggtatcgacaacgcctcgtactaccgcctgatgccggacgacaagcgctattacatcaac
gattccggcaccggcaacaccctggacctgagccacccctgcgtgctgcagctggtcacc
gactcgctgcgctactgggccggcgaaatgcacgtggacggcttccgcttcgacctggcg
accatccttggccgctaccacgacggctacagcgaacgccacggcttcctcgtcgcctgc
cgccaggacccgatgctgagccaggtgaagctgattgccgaaccatgggactgcggcccg
ggcggctaccaggtgggcaactttgccccgggctgggcagagtggaacgaccgcttccgc
gacaccgtgcgcgccttctggaaaggcgacgaaggccaactggccgactttgcctcgcgc
atgaccgcctcgggggacatgttcaacaaccgtggccggcgtccctatgcctcggtcaac
ttcgtcaccgcccacgacggtttcaccttgcgcgacctggtgtcgtacaaccacaagcac
aacgaggacaacgacgagaacaaccaggacggcaccgataacaacctgtcatggaactgc
ggtgtcgaggggccaaccgacgacccggccgtgaatgccctgcgcatgcgccagatgcgc
aactacttcgctaccctgctgctggcccagggcacgccgatgatcgtcgccggcgatgag
ttcagccgtacccagcacggcaacaacaatgcctattgccaggacagcgagatcggctgg
gtgaactgggacctggaccaggagggcaaagagctgctggctttcgtcaagcgcctcacc
cgcctgcgcctggcctacccggtactgcgtcgctcgcgcttcctggttggcgactacaat
gaggcgatcggcgtcaaggatgtgacctggctggcaccggatggcaacgagatgagcgtg
gaacaatgggaagacccgcacgggcgttgcctgggcatgttgatcgatggccgtgcccag
gtcagcggcattgccaggccaggcgccgaggccaccgtgctgctgatcgtcaatgcccac
catgacatcgtgccgttccagctgccaaccgtgcccgagggggattactggagttgcctg
gtcgataccgaccggccagagctgcgcaaggggcagcatctgcagttcgacagcaccttc
gaggtgaaggggcggtcgttgctgctgatggtgttgcagcgtgatgaggagtga
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