Pseudomonas putida DLL-E4: DW66_4214
Help
Entry
DW66_4214 CDS
T03439
Name
(GenBank) sigma-54 dependent transcription regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ppud
Pseudomonas putida DLL-E4
Pathway
ppud02020
Two-component system
ppud02025
Biofilm formation - Pseudomonas aeruginosa
ppud02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DW66_4214
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
DW66_4214
09142 Cell motility
02040 Flagellar assembly
DW66_4214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppud03000
]
DW66_4214
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppud02035
]
DW66_4214
Transcription factors [BR:
ppud03000
]
Prokaryotic type
Helix-turn-helix
Other families
DW66_4214
Bacterial motility proteins [BR:
ppud02035
]
Flagellar system
Flagellar assembly proteins
Others
DW66_4214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
AAA_7
nSTAND3
AAA
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHZ78718
UniProt:
A0A059V4K7
LinkDB
All DBs
Position
4607212..4608687
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSARRRDLAVVLNFLGEENLACSSQEWQQMVEPLSSSREVLCVLIGTV
NAPGNLLGLVKTVAGWDEFLPMLLLGEISSAEFPEDLRRRVLSNLEVPPSYSQLLDSLHR
AQVYREMYDQARERGRQREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSIDVRIIAATHKNLETMIEEGTFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSASIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVSELPKKFRYVDDEDEQMVDSLRSDLEERVAINGHAPN
FGNHAMLPPEGLDLKDYLGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRQGGEEQAED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaagattctgctgatcgatgacgacagcgcgcgccgccgcgacttg
gcggtggtgctgaactttctcggcgaagaaaacctcgcttgctccagccaggaatggcag
caaatggtcgagccgttgtcttcgagtcgcgaagtgctgtgcgtgctcatcggcaccgtg
aacgctccgggcaacctccttgggctcgttaagacagtggctgggtgggatgagttcctt
ccgatgctgcttttaggtgaaatttcttctgcggagttcccggaagaccttcgccgccgc
gtgctttccaacctggaagtgccgccaagctacagccagctgctggattcgctgcaccgt
gcccaggtctatcgcgagatgtacgaccaggcgcgagagcgcgggcgccagcgcgagccc
aacctgttccgcagcctggtcggcaccagccgtgccatccagcacgtgcggcagatgatg
cagcaggtggccgacaccgacgctagcgtgctgatcctgggtgagtccggcaccggcaag
gaagtggtggcgcgcaacctgcactaccattccaagcgccgcgaagcgccgttcgtgccg
gtcaactgcggcgcgatcccggccgagcttctggaaagcgaactgttcggccacgagaag
ggcgccttcactggggcgatcaccagccgtgccgggcgtttcgagctggccaacggcggt
accctgttcctcgacgaaatcggcgacatgccgctgccgatgcaggtcaaactgctgcgc
gtgttgcaggagcgtaccttcgagcgcgtgggtagcaacaagacccagagcatcgatgtg
cgcatcatcgccgcgacccacaagaacctcgagaccatgatcgaggagggcacgttccgc
gaagacctgtactaccgcctgaacgtgttccccatcgaaatggcgccgctgcgtgagcgg
gtggaagacatcccgctgctgatgaacgagctgatctcgcgcatggagcacgagaagcgt
ggttccatccgtttcaactctgcctccatcatgtcgctgtgccgccacggctggccgggc
aacgtgcgcgagctggccaacctggtcgagcgcatggcgatcatgcacccgtatggggtg
attggcgtgtccgagttgccgaagaaattccgctacgtcgatgacgaagacgagcagatg
gtcgacagcctgcgcagcgacctggaagagcgcgtggcgatcaacggccatgcgccgaat
ttcggcaaccacgccatgctgccgcctgaaggcctggacctgaaggattacctcggtagc
ctggagcagggcctgatccagcaggcgctggacgatgccaacggtatcgttgcgcgtgcg
gctgaacgtttgcgtattcgccgtaccaccctggtcgagaagatgcgcaagtacggcatg
agccgccagggtggcgaggaacaggcggaggattga
DBGET
integrated database retrieval system
