Pseudomonas putida DLL-E4: DW66_4393
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Entry
DW66_4393 CDS
T03439
Name
(GenBank) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ppud
Pseudomonas putida DLL-E4
Pathway
ppud00260
Glycine, serine and threonine metabolism
ppud00270
Cysteine and methionine metabolism
ppud00450
Selenocompound metabolism
ppud00670
One carbon pool by folate
ppud01100
Metabolic pathways
ppud01110
Biosynthesis of secondary metabolites
ppud01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DW66_4393
00270 Cysteine and methionine metabolism
DW66_4393
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DW66_4393
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DW66_4393
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppud04147
]
DW66_4393
Enzymes [BR:
ppud01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
DW66_4393
Exosome [BR:
ppud04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
DW66_4393
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Gene cluster
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AHZ78894
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Position
complement(4819469..4820686)
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AA seq
405 aa
AA seq
DB search
MGCAIVAAFTLPMGLTMSDKPRNFATRTIHAGEQFSVADNAIFPAIVTASSFTKRSLDDK
PEYSYSRVGNPTRHAYETCVAALEEGVGAVACASGVNATATVLELLPKDAHVVVMNGVYG
GTFRIMEDYRSRTSGLTTTYVDLNDLEAVAAAIKPETQLIWIESPTNPLLHLVDIKAVCD
LAKARGILTCIDNTFCSPWNQRPITLGVDLVMHSASKYIGGHSDLTGGVVVAANDALLAR
LRRISMAIGAVQGPFDCYLALRGLKTLDVRMERQCANALQVARFLESHAQIDQVYYPGLE
SHPQHELCKRQMRSGGAVVAMKVRGDRAALNRLVEALQIFVLADSLGGVESMINHSWSMS
HCSLSPEQKGVMGISENLLRLSVGIEDYRDLVEDLDGALKAAAAM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
ttgggttgtgcgatagttgcagctttcactctgccaatgggcctgaccatgtccgacaag
ccgcgcaatttcgccacccgtaccattcacgccggtgagcagttcagcgtcgccgataac
gctattttcccggcgatcgtcaccgccagctcgttcaccaagcgcagcctggacgacaag
ccggaatactcctacagccgcgtcggcaaccccacccggcatgcctatgaaacctgtgtc
gccgccctggaagagggcgttggcgcggtcgcctgcgcctcgggtgtgaacgccaccgcc
accgtgctggagttgctgcccaaggatgcccacgtggtggtgatgaacggcgtgtacggc
ggcaccttccgcatcatggaagactaccgcagccgcacctcgggcctgaccaccacctac
gtcgacctcaacgacctcgaggcggtggccgccgccatcaagccggaaacccagctgatc
tggatcgaatcgccgaccaacccgttgctgcacctggtcgacatcaaggcggtgtgcgac
ctggccaaggcacggggcatcctcacttgcatcgacaacaccttctgctcgccgtggaac
cagcgcccgatcaccctgggcgtggacctggtgatgcactcggccagcaagtacatcggc
ggccactccgacctcaccggtggcgtggtggtagctgccaacgatgcgctgttggcgcgc
ctgcgccgcatcagcatggcgattggcgcggtgcaggggccgttcgactgctacctggcc
ctgcgcggtctgaagaccctggatgtgcgcatggagcgccagtgtgccaatgccctgcag
gtggcacgcttcctcgaaagccacgcgcagatcgatcaggtgtattacccggggctggaa
agccacccgcaacatgagttgtgcaaacggcagatgcgcagtggcggggcggtagtggcg
atgaaggtcaggggcgaccgggctgcgctaaaccgcctggtggaggcgctgcagatcttc
gtgctggccgactcgctgggcggggtggaaagcatgatcaaccactcctggagcatgtcg
cactgctcgctgagcccggagcagaagggcgtgatgggcatcagcgaaaacctgctgcgg
ttgtcggtggggatcgaggattaccgggacctggtcgaggacctggatggggcattgaag
gctgcggctgctatgtga
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