Pseudomonas putida DLL-E4: DW66_4585 Help Entry DW66_4585         CDS       T03439                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism ppud  Pseudomonas putida DLL-E4 Brite KEGG Orthology (KO) [BR:ppud00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ppud03400]     DW66_4585 Enzymes [BR:ppud01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      DW66_4585     5.6.2.6  RNA 3'-5' helicase      DW66_4585 DNA repair and recombination proteins [BR:ppud03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     DW66_4585 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD WHD_4th_Lhr WHD_Lhr WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 HTH_5 HTH_IclR AAA_25 HTH_9 Motif Other DBs NCBI-ProteinID:  AHZ79084 LinkDB All DBs Position 5035144..5039502 Genome browser AA seq 1452 aa AA seqDB search MGAGLPAKVIADPADERPLANPPYTLHNQHMNLPAKHHPVLELFHPAVRTWFRRHFATVT DAQAQAWPLTHAGKSMLLAAPTGSGKTLSAFLAVLDELFRQGLEHQGELPAQTQVVYVSP LKALSNDIRLNLQAPLEGISQAIADQGLNAPRITTAVRSGDTPQKERAAMRKLAPHILVT TPESLYVLMGSASGRKGLASVHTVIIDEIHALAGNKRGAHLALTLERLQALCNRPLRRIG LSATQRPVERVAQFLVGNSRPCAIVDVGHARQRDLAIEVPPVPLGAVMATDVWGLVYDRL ATLAREHRTTLVFVNTRRLAERITRHLSDRLGKEAVAAHHGSLAKELRLDAEQRLKNGQL QVLVATASLELGIDIGDIDLVCQIASPGSIAAFLQRVGRAGHQVDGVPKGRLFPTSRDDL IECVALLDCIRRGELDELHIPRAPLDVLAQQIVAEASNQPWHEQALFDCLRQATPYAELD QQHYQALLRMLAEGYNGRQGVRSAYLHRDAVSGTLRGRRGSQLTALTSGGTIPDNADYAV LLEPQALNIGSVNEDFAVESIAGDIFQLGNASYRILRVEPGRVRVEDAHGLPPTIPFWLG EAPGRSDELSAAVARLQAQIDQQLADNNQAEVLAWLQATFELGEAAAGQLLDYLARTREV LGALPSQDTLVMERFFDESGGTQLIIHSPYGSRINRAWGLALRKRFCRTFNFELQAAASE DAIVLSLSSSHSFELDDVWRYLNSRNAESILVQALLDAPLFGVRWRWNASVTMALPRFVG GRKVAPQIQRMKSEDLIAAVFPDQIACLENIVGERQIPDHPLVEQTLDDCLHEAMDSEGW LALLRRMESGTVRLLCRDLPAPSPLAAAILNARPYAFLDDAPLEERRTQAVLNRRWNEVQ NGDDLGALDADAIAAVTAEAWPQPGNADEMHEALMGLGAISQDEVQGNAGWELLLRQLAK AGRALRLVDEKLWLARERLSLLQVLYPGSRLEPALQVLPGFDQAIEPDIALVELLRARLS GHGPLTRAQIAAALGKPLPAIEQALTCLEAEGYVLRGHFSPGASELQWCERHLLARIHRY TVKRLRREIEPVSLQDFMRFLFDWQHLADDTRLRGPQAVAEVLGQLQGFPSAAGAWEAEL LPARIKDYSPNWLDDACRSGQFAWSRLAATVSSNTLSSTPLVLLPREHLGLWRSLAPVPA LDSLGARAQRVHEVLNAHGALFFDELAHDAHLLPSELETALQELVGAGLVGADSFTGLRS LITPAAKRTSRNSRRGHPPLSSSMSHAGRWALLRRGTVDDSQRLEHIARALLRRYGVVCW RLLERESDVLPPWRELLRCYHRLEARGEIRGGRFISGLAGEQFALPEAVGLLRQVRRREL DGALVVVSASDPLNLVGSLLPGAKVPAVSGNRLLYRDGVPVAVRVAGHYSYLVEAPAQEQ ESWRQKLLRDTI NT seq 4359 nt NT seq  +upstreamnt  +downstreamnt gtgggagcgggtttacccgcgaaggtcatagccgatccggcagacgaacggccccttgcc aacccgccctacaccctccataaccaacacatgaacctgcccgccaaacaccacccggtg ctcgagctgttccaccccgccgtgcgcacctggttccgtcgccacttcgccacggtgacc gatgcccaggcccaggcctggccgttgacccatgcgggcaagtcgatgctgctagccgca ccgaccggctcgggcaagaccctcagtgcgttcctggccgtgctcgacgaactgttccgc caaggcctggagcaccaaggcgagctaccagcgcaaacccaggtggtctacgtttcgcca ctcaaggcgctgtccaacgatatccgcctgaacctgcaagccccgctcgaaggcatcagc caggccatcgcggaccagggcctgaacgccccgcgcatcaccacggccgtgcgcagcggc gacaccccgcagaaggagcgtgccgccatgcgcaagctggcgccgcacatcctggtgacc acccccgaatcgctctacgtgctgatgggctcggcttctggccgtaaaggcctggccagc gtgcacaccgtgatcatcgacgaaatccatgccctggccggcaacaagcgcggcgcccac ctggcactgaccctggagcgcctgcaggccctgtgcaaccggccgttgcggcgcatcggc ctgtcggccacgcaacgcccggtagagcgggtggcgcaatttctggtcggcaacagccgc ccctgcgcaatcgtcgatgtcggccacgctcggcagcgcgacctggccatcgaggtgccg ccagtgccgctgggtgcagtgatggccaccgatgtctggggcctggtctatgaccgcctg gccaccctggcgcgcgaacaccgcaccaccctggtgttcgtcaacacccgacggctggcc gaacgcatcacccgccacctcagcgaccgcctgggcaaggaggcggttgccgcgcaccac ggcagcctggccaaggaactacgcctggatgccgaacaacgccttaagaatggccagttg caggtgctggtggccaccgcatcgctggagctgggcatcgatatcggcgacatcgatctg gtctgccagatcgcttcaccaggttcgatagcggcctttctgcagcgggtcggccgcgcc ggccaccaggtcgatggcgtgcccaagggccgcttgttcccgacctcgcgtgatgacctg atcgaatgcgtggccctgctcgactgcatacgccggggcgagctggacgagctgcacatt ccccgggcgccgctggacgtgctggcccagcagatcgtcgccgaagccagcaaccagccc tggcacgaacaagccctgttcgactgcctgcgccaggccacgccctatgccgaactcgac cagcaacattaccaggccctgctgcgcatgctcgccgagggctataacggccgccagggc gtgcgcagtgcctacctgcaccgcgatgcggtgagcggcaccctgcgtggccgccgcggc agccagctgaccgccctgaccagcggcggcaccatccccgacaacgccgactacgccgtg ctgctcgaaccgcaggcgctgaacatcggcagcgtcaacgaagactttgcggtggaaagc atcgccggcgatatcttccagctgggcaatgcttcctatcgcatcctgcgcgtcgaaccg ggccgggtgcgggtggaggatgcccatggcctgccaccgaccattccattctggctgggc gaggcgccggggcgcagcgatgagctgtctgccgcggtggcccggctgcaggcacagatc gaccaacagctggctgacaacaaccaagccgaggtgctggcatggttgcaggccaccttc gaactgggcgaagccgccgctggccagttgctcgactacctggcccgcacccgcgaagtg cttggtgccctgccctcgcaggacacgctggtgatggagcgcttcttcgatgagtccggc ggtacccagttgatcatccattcgccctacggcagccgcatcaaccgcgcctggggcctg gccctgcgcaagcgcttctgccgcaccttcaacttcgagttgcaggcggcggccagcgag gacgccatcgtgctgtcgctgtcctccagccacagcttcgaactggacgacgtgtggcgt tacctgaatagccgcaacgccgagtcgatccttgtccaggcactgctcgatgcgccgctg ttcggcgtgcgctggcgctggaacgccagcgtgaccatggccttgccgcgctttgtcggc ggtcgcaaggtggcgccacagatccagcggatgaagagtgaagacctgattgctgccgtg ttccccgaccagatcgcctgcctggagaacatcgtcggcgagcggcagattcccgatcat ccgctggtcgagcaaaccctcgacgactgcctgcacgaggcgatggacagcgaaggctgg ctagcacttttgcggcgcatggaaagcggcacggtacgcctgctgtgccgcgatctaccc gccccttcgccgttggcggcggccatcctcaatgctcggccatatgccttcctggatgac gcgccactggaagagcgtcgcacgcaggcagtgctcaaccggcgctggaacgaggtgcag aacggcgacgacctgggcgcgctggacgccgatgcgattgccgccgtgacggccgaggcc tggccgcagccgggcaacgccgacgaaatgcatgaagcgttgatgggcctgggtgccatc agccaggacgaagtgcagggcaatgccggttgggaactgctgctcagacaattggccaag gccggccgggccttgcgcctggtggatgaaaaactgtggctggcacgcgagcggttgagt ctgctgcaggtgctgtatcccggctcccggctggaacctgcgttgcaggtactgccaggc ttcgatcaggccatcgagccggacattgcgctggtcgaactgttgcgagcccgcctgagc ggccatggcccgctgacccgcgcgcagattgcggcagcacttggcaaaccgctgccggcc atcgaacaggccctgacctgcctggaggccgaaggctatgtgctgcgtgggcatttcagc cccggcgcaagcgaactgcaatggtgcgaacgccatctgcttgcgcgcatccaccgctac acggtcaaacgcctgcgccgggagatcgagccggtcagcctgcaggacttcatgcgcttt ctgttcgactggcagcacctggctgacgacacgcgcctgcgcggcccgcaagccgtggcc gaggtactaggccagttacaaggattcccgagtgccgccggagcatgggaggccgaactg ctgccagcacgtatcaaggactacagcccgaactggctcgacgatgcctgccgtagcggg cagttcgcctggagccggctggcggcgaccgtgtcgagcaacaccttgtcgagcacaccg ctggtgctgctgccgcgcgagcatcttgggttgtggcgcagccttgcccccgtacccgcc ctggatagcctcggcgcacgagcgcaacgcgtccacgaggtgctgaacgcgcatggcgcg ctgttcttcgacgagctggcacacgacgcccacctactacccagcgaactggagacggcc ttgcaagagctggtaggcgcaggcctggtgggggccgacagcttcaccggcctgcgcagc ctgatcaccccggcggcgaaacgcacatcgcgcaacagccgacgcggccatccgccgctg tccagcagcatgtcccatgccgggcgctgggccttgctgcgcaggggcactgtagacgac agccagcgcctggagcacatcgcccgggccctgcttcggcgctatggcgtggtgtgctgg cgcctgctggagcgcgaaagcgatgtgctgccgccctggcgcgaactgctgcgctgctat caccggctggaagcgcgtggcgagattcgtggcgggcgcttcatttccgggctggccggc gaacagttcgccttgccggaggcggtggggctgctgcggcaggtgcggcggcgtgaattg gacggggcattggtggtggtgagtgccagtgacccactgaacctggtcgggtcgttgctg ccgggggcgaaagtgccggcggtgagcggcaaccgcctgttgtaccgcgacggggtgccg gtggcggtgcgggtggccgggcactattcatatctggttgaagcgccggcacaagagcag gaaagctggcggcagaagctgctgcgcgacaccatctga

DBGET integrated database retrieval system