Pseudomonas putida DLL-E4: DW66_4626
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Entry
DW66_4626 CDS
T03439
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppud
Pseudomonas putida DLL-E4
Pathway
ppud03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DW66_4626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppud03400
]
DW66_4626
Enzymes [BR:
ppud01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DW66_4626
DNA repair and recombination proteins [BR:
ppud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DW66_4626
Prokaryotic type
DW66_4626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHZ79125
LinkDB
All DBs
Position
complement(5087074..5087766)
Genome browser
AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKAALRAEFDQPYMHQLREFLRSEYAAGKEIYPPGPLIFNALNSTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIASHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWEFFTDRVIQVVSEQCPNVVFLLWGSHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFLGCGHFSRANSFLEQRGLAPINWALPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaaactcgaacccagctggaaggccgccttgcgcgcggaa
ttcgaccagccctacatgcatcagttgcgcgagttcctgcgcagcgagtacgccgccggc
aaagagatctacccgccagggccgttgatcttcaacgcactcaactcgacgccgctggac
caggtgaaggtggtcatccttggccaggacccttaccacgggccgggccaggcgcatggt
ctgtgcttctcggtgcagccgggcgtggccacgccaccgtcgctggtcaacatctacaag
gagctgcagcgcgacctgaacatcccgattgccagtcatggctacctgcagagctgggcc
gagcagggcgtgctgttgctcaacacgaccatgaccgtggagcgcgccaatgccgcgtcg
catgccaagaagggctgggagttctttaccgaccgggtcatccaggtggttagcgagcag
tgcccgaacgtggtgttcctgctgtggggctcgcatgcgcaaagcaagcagaagctgata
gacgggaccaagcacctggtgctgaaatcggtgcatccatcaccattgtcggcttaccgt
gggttcctggggtgcgggcatttcagccgggccaacagtttcctcgagcagcgcgggctg
gcgccgatcaactgggcattgccacccttgtaa
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