Pseudomonas putida DLL-E4: DW66_4671
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Entry
DW66_4671 CDS
T03439
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ppud
Pseudomonas putida DLL-E4
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppud03400
]
DW66_4671
DNA repair and recombination proteins [BR:
ppud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
DW66_4671
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
SLFN-g3_helicase
FtsK_SpoIIIE
CbiA
ResIII
AAA_16
AAA_10
AAA_30
TrwB_AAD_bind
T2SSE
AAA_25
AAA_19
AAA_7
nSTAND3
AAA_6
Hydrolase
SRP54
DUF2379
P-loop_TraG
Zeta_toxin
EF-hand_7
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AHZ79170
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All DBs
Position
complement(5141190..5142665)
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AA seq
491 aa
AA seq
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MSEFSTIVVGAGPDGQPVGQAMRLANRHGLVAGATGTGKTVTLQHLAEAFSDAGVAVFAA
DVKGDLCGLGAAGAPQGKVAERIAGMPWLGHRPQAYPVSLWDIAGQSGHPLRTTLSEMGP
LLLGNLLELTDSQQAALYAAFKVADREGLLLLDLKDLKALLAHLKDNPQLLGEDSALMTT
ASTQALLRRLATLEQQGAEALFGEPGLQLEDLLRPDPDGRGRIHLLDASRLVHDAPKVYA
TFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLFNDTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPGDLPDAVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDTLAVLTEL
GIGEALVGTLEEKGTPAMVQRVLIAPPQSRIGPLSAAERSVLIANSPLAGRYDKPVDRES
AYEMLTQRKGEPVEPAPQPKADEESFADKAGEFLQSAAGQAIKSAVRQAANQLGRQLVRG
LMGSLLGGKKR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattttcgaccatcgttgtaggtgctggtccggatggccagccggttgggcaa
gccatgaggttggccaaccgccatggcctggttgcgggcgctacgggtactggcaagacc
gtcaccctgcagcatctggcggaagcgttcagtgacgccggggttgcggtgttcgccgcc
gatgtcaaaggcgacctgtgcggcctgggcgctgctggtgcgccgcaggggaaggtggcc
gagcgtatcgccggcatgccctggctggggcacaggccccaggcttacccggtgagcctg
tgggacattgccgggcagtccggccacccgctgcgtaccaccctcagtgaaatggggccg
ctgctactgggcaacctgctggaactgaccgacagccaacaggcggcgctttacgcggcg
ttcaaggtggccgaccgtgaaggcctgctgctgctcgacctcaaggacctcaaggcgctg
ctcgcgcacctgaaggacaacccgcaactgctgggcgaagacagcgcgctgatgaccacg
gcctccactcaggcgctgttgcgccggttggcgaccctggagcagcagggcgccgaggcg
ttgttcggtgaaccggggttgcagcttgaggacctcctgcggccagacccggatggccgt
gggcgtatccacctgctggacgccagccggttggttcacgatgcccccaaggtgtacgcg
accttcctgttgtggctactggccgagttgttcgaacagttgcccgagcgtggtgatgcc
gacaagccggtgctggcgttgttcttcgatgaagcgcacttgttgttcaacgatacaccc
aaggcattgcaggatcgtctggagcaggtggtgcggctgattcgttccaagggcgtgggt
gtgtacttcgtcacccagtcgccgggagacttgccagatgcggtgctggcccagttgggc
ttgcgcattcagcatggcttgcgggcgttcactgccaaggagcagaagtcgctgcgggcg
gtggctgatggcttccgccccaacccggcgttcgacaccttggcggtgctgaccgaactg
ggtattggcgaggcgctggtggggacactggaagagaagggcacgccagcgatggtgcag
cgtgtgctgattgcaccgccgcagtcgcgtatcgggccgttgagcgcggctgagcgcagt
gtgctgattgccaattcgccgctggcagggcgttacgacaagccggtggaccgtgagtcg
gcgtatgagatgctgacccagcgcaagggcgagccggtggagcccgcgccgcaacccaag
gcggatgaagaaagctttgccgacaaggctggtgagttcttgcaaagtgcggcagggcag
gccatcaagtcggcggtgcgccaggcggccaaccagttggggcggcagttggtgcgaggg
ttgatggggtcgttgctggggggcaagaaaaggtag
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