KEGG   Pseudomonas putida DLL-E4: DW66_5595
Entry
DW66_5595         CDS       T03439                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ppud  Pseudomonas putida DLL-E4
Pathway
ppud00300  Lysine biosynthesis
ppud00470  D-Amino acid metabolism
ppud01100  Metabolic pathways
ppud01110  Biosynthesis of secondary metabolites
ppud01120  Microbial metabolism in diverse environments
ppud01230  Biosynthesis of amino acids
Module
ppud_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppud00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    DW66_5595
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    DW66_5595
Enzymes [BR:ppud01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     DW66_5595
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AHZ80091
LinkDB
Position
6153915..6155162
AA seq 415 aa
MNAFNYRDGELFAEGVGLSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEEPPLVADYIKAIRERVGDRDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AVIDAAMNDLIRPALYQAWMGVSAVKPRAGEGRAYDLVGPICETGDFLGKDRVLNLAEGD
LLAVQSAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETIAELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaacgctttcaactaccgcgacggcgagctgttcgcggaaggcgtgggcctgtcggcc
atcgccgaacgctacggcaccccgacctacgtgtattcgcgcgcccacatcgaggcccag
taccgtagctacgccgatgcactgcaaggcaccgagcacctggtgtgcttcgcggtcaag
gccaactccaaccttggcgtgctgaacgtgctggcacgcctgggcgcaggctttgacatc
gtctctggcggtgagctggagcgcgtgctggccgctggcggccgtgccgaccgcgtggtg
ttctccggtgtcggcaagacccgcgaggacatgcgccgtgccctggaagtcggcgtgcac
tgcttcaacgtcgaatccaccgacgaactggagcgcctgcaagtggtggccgccgagatg
ggcaaggttgccccggtctcgctgcgggtcaacccggacgtcgacgccggcacccacccg
tacatctccaccggcctgaaagagaacaagttcggcatcgccatcgccgacgccgaggcc
atctacgtgcgggccgcgcagttgccgaacctggaagtggtcggcgtcgactgccacatc
ggttcgcagctgaccaccgtcgagcctttcctcgatgcccttgaccgcctgctggtgctg
gtagaccgcctggccgagtgcggcatccatctgcgccacctggacctgggtggcggcgtc
ggcgtgcgttaccgcgatgaggagccgccgctggtggccgactacatcaaggcgatccgc
gagcgcgtaggcgaccgcgacctggccctggtgttcgagccgggccgctacatcgtggcc
aacgccggcgtcctgctgacccgcgtggaatacctcaagcacaccgaacacaaggacttc
gccgtcatcgatgcggcgatgaacgacctgatccgcccggccctgtaccaggcctggatg
ggtgtcagcgcggtcaagccacgcgcaggcgaaggccgtgcctacgacctggtcggcccg
atctgcgagactggcgacttcctcggcaaggaccgcgtgctgaacctggccgaaggtgac
ctgctggccgtacagtccgcgggcgcctatggttttgtcatgagctccaactacaacacc
cgtggccgttgcgctgaaatcctggtcgacggcgaccaggccttcgaagtacgccgccgc
gagaccatcgccgaattgtacgctggcgaaagcctgctgccggagtaa

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