Pseudomonas putida DLL-E4: DW66_5595
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Entry
DW66_5595 CDS
T03439
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppud
Pseudomonas putida DLL-E4
Pathway
ppud00300
Lysine biosynthesis
ppud00470
D-Amino acid metabolism
ppud01100
Metabolic pathways
ppud01110
Biosynthesis of secondary metabolites
ppud01120
Microbial metabolism in diverse environments
ppud01230
Biosynthesis of amino acids
Module
ppud_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DW66_5595
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DW66_5595
Enzymes [BR:
ppud01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DW66_5595
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHZ80091
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All DBs
Position
6153915..6155162
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AA seq
415 aa
AA seq
DB search
MNAFNYRDGELFAEGVGLSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEEPPLVADYIKAIRERVGDRDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AVIDAAMNDLIRPALYQAWMGVSAVKPRAGEGRAYDLVGPICETGDFLGKDRVLNLAEGD
LLAVQSAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETIAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctttcaactaccgcgacggcgagctgttcgcggaaggcgtgggcctgtcggcc
atcgccgaacgctacggcaccccgacctacgtgtattcgcgcgcccacatcgaggcccag
taccgtagctacgccgatgcactgcaaggcaccgagcacctggtgtgcttcgcggtcaag
gccaactccaaccttggcgtgctgaacgtgctggcacgcctgggcgcaggctttgacatc
gtctctggcggtgagctggagcgcgtgctggccgctggcggccgtgccgaccgcgtggtg
ttctccggtgtcggcaagacccgcgaggacatgcgccgtgccctggaagtcggcgtgcac
tgcttcaacgtcgaatccaccgacgaactggagcgcctgcaagtggtggccgccgagatg
ggcaaggttgccccggtctcgctgcgggtcaacccggacgtcgacgccggcacccacccg
tacatctccaccggcctgaaagagaacaagttcggcatcgccatcgccgacgccgaggcc
atctacgtgcgggccgcgcagttgccgaacctggaagtggtcggcgtcgactgccacatc
ggttcgcagctgaccaccgtcgagcctttcctcgatgcccttgaccgcctgctggtgctg
gtagaccgcctggccgagtgcggcatccatctgcgccacctggacctgggtggcggcgtc
ggcgtgcgttaccgcgatgaggagccgccgctggtggccgactacatcaaggcgatccgc
gagcgcgtaggcgaccgcgacctggccctggtgttcgagccgggccgctacatcgtggcc
aacgccggcgtcctgctgacccgcgtggaatacctcaagcacaccgaacacaaggacttc
gccgtcatcgatgcggcgatgaacgacctgatccgcccggccctgtaccaggcctggatg
ggtgtcagcgcggtcaagccacgcgcaggcgaaggccgtgcctacgacctggtcggcccg
atctgcgagactggcgacttcctcggcaaggaccgcgtgctgaacctggccgaaggtgac
ctgctggccgtacagtccgcgggcgcctatggttttgtcatgagctccaactacaacacc
cgtggccgttgcgctgaaatcctggtcgacggcgaccaggccttcgaagtacgccgccgc
gagaccatcgccgaattgtacgctggcgaaagcctgctgccggagtaa
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