Pseudomonas putida DLL-E4: DW66_5879
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Entry
DW66_5879 CDS
T03439
Name
(GenBank) chromosome segregation protein SMC
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
ppud
Pseudomonas putida DLL-E4
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
DW66_5879
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Gene cluster
GFIT
Motif
Pfam:
AAA_21
AAA_15
OLD-like_TOPRIM
SMC_N
DUF2813
AAA_23
ABC_tran
AAA_29
AAA_22
AAA_27
ORC-CDC6-like
AAA_16
AAA_5
Enterotoxin_b
Motif
Other DBs
NCBI-ProteinID:
AHZ80373
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Position
6456254..6458209
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AA seq
651 aa
AA seq
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MKLKYIRVCGFQSFGVKPVTIDLESLTFLIGPNGSGKTATLQALCRLFSFDPNQRRLRRS
DFFVPHDEEDVPAERALWIEADFHFPELTDGGNEHPTIPCHFGHMRLDDLDGVPRVRYRL
DASIGLEDEIEQSLRYVLDVDESGIPIETVPVPRDERTQIQVHYLPARRDPAEHITYGAN
ALLGRLLRAVNWTDQREKISQLTTDISQSLRDNRSVVSLGAGITNAWKALHKGKFFKDPS
LTFVATEIESLLRHLSVSFTPGHGEQQVDFSRLSDGQKSMLYLTLVLSSQAIGRSVLGGD
DESFDIEKLRPAVFTIIALEEPENSLSPHYLGRIVSSLKTLVGDPHAFDAQALIATHAPS
MLRRVEPTDIRYLRLDDARCTVVSTITMPPDTKGESYKFVREAVQAFPELYFSRLVILGE
GDSEEIVLPRLLAAKRLMVDEAAVTIAPLGGRHVNHFWRLLSGLNIPYVTLLDLDVGRHG
GGWGRIKYVATELMKHRPTVAYLTEDQVSKLPKWDNPTYPLLDVEKNPQYKNYVQDLEPL
GVFFSSPMDLDFSMLVAFPKAFGLSPTDLALPKVNQVKSVLGESCFKPTQYTPLQRKHFI
AYHKLFKLDSKPKSHLEALSKLTDEELLKAMPASLSRLVDHVIMRVEALHE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctcaagtacattcgcgtctgtggtttccagtcgtttggcgtgaagccggtgacg
attgatctggagagtcttacctttctcatcgggccaaacggttctggcaagaccgcaacg
ctgcaggcgctatgccgcctgttttcatttgaccccaatcaacggcgactccgtcgatcc
gacttcttcgtgccgcatgacgaggaagatgtgccggctgagcgagcgctctggattgaa
gcggacttccattttcccgagctgactgacggcggaaatgagcacccgaccatcccttgt
cacttcggccacatgcgccttgacgaccttgatggagtgccacgagtcaggtatcgcctg
gacgcctctatcggccttgaggacgagattgagcagagtttgcgttatgtcctggatgtc
gacgagagcggcatccctattgagacggtgcccgtcccgcgagatgagcggacgcagatt
caggtgcattacctgccggcacgccgagatcccgctgagcacatcacctatggcgcgaat
gcgttgttgggccgtttgctccgtgcggtgaactggacagaccagcgcgagaagatcagc
cagttgaccaccgatatctcgcagagcctgcgtgataatcgctcggtggtcagccttggt
gccggcatcaccaacgcctggaaggcgttgcacaaagggaagtttttcaaagatccaagc
ttgaccttcgtcgcaaccgagatcgagtcgttgctccggcatttgtcggtgtctttcacg
cccgggcacggtgagcagcaggtcgatttttcgaggttgagtgacggccagaaatcgatg
ctgtacctaacactggtgctgtcctcccaagctatcgggcgctctgtacttggcggcgat
gacgagtcgtttgacattgaaaagctgagacctgccgtctttacgatcattgccctggaa
gagcctgaaaacagtctctcaccgcactacctcggacgcatcgtgtcttcgctgaagacg
ctggtgggtgaccctcatgcgttcgacgcgcaagcgttgatcgccacgcatgcaccttca
atgctgcgacgtgttgagccgaccgatattcgttatctgaggctcgatgacgcgcggtgc
accgtggtctcaaccattacgatgccgccagacaccaagggcgagtcatacaagttcgtg
agggaggccgtgcaggcattccctgagctgtatttctctcgtctggtgatcctgggagag
ggtgacagtgaggagatcgtgctcccgcgcctgctggccgccaaaaggctgatggttgat
gaggcagcggtgactatcgctccactcggtgggcgacacgtcaaccacttctggcgcctg
ttgagcgggctgaacattccttatgtgacgctgttggatcttgatgtcggtcggcatggg
ggcggatggggacgtatcaaatacgtcgcgaccgaactgatgaagcaccgccccactgtg
gcgtacctaacggaagatcaagtctccaaattacccaaatgggacaaccctacataccct
ctgctggatgtggaaaagaacccgcagtacaagaattacgtgcaggatctagaaccgttg
ggcgtgtttttctcatcaccgatggatctggatttctcaatgctagtggcctttcccaag
gcgttcggcctctcaccaacggacttggcattgccgaaggtcaaccaggtgaaatcggtg
ctcggggagagctgcttcaagccaacccaatacacgccattgcaacgcaagcatttcatt
gcgtatcacaagctgttcaagttggacagtaagcccaagtcccatttggaagcgctttca
aagctcacggacgaggagcttctcaaagcgatgccggcctccctgtcgcgcttggttgac
catgtgatcatgcgagtcgaggcgcttcacgaatga
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