Pungitius pungitius (ninespine stickleback): 119193874
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Entry
119193874 CDS
T07626
Symbol
znfx1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119193874 (znfx1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
SLFN-g3_helicase
ResIII
Viral_helicase1
PhoH
DEAD
nSTAND3
AAA_16
AAA_22
AAA_25
AAA
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
119193874
NCBI-ProteinID:
XP_062419749
LinkDB
All DBs
Position
8:complement(5127772..5141039)
Genome browser
AA seq
1925 aa
AA seq
DB search
MERPTGDDDGVPLPAAAARGKGRGIRGGGRGWGGGGGRGAAGKGWGGGEGAAAGKGWGGG
RGGAAGKGWGGGGGGGGAAGKGWGGGEGAAAGNGRGGGRGGGAAAGKGWGGGEGAAAGNG
RGGGRGGGGAAAGGGRGFGGAAAAGGRGGDSTGRPHGRGLDFKTLEELSGNDPYVVAIAL
SAHPALKEVVSATEMSKNYIELLCLLLSKSFKSQADRSTRQHLAGTIRDSGFFRTVLPHY
VGGMGSESNANRLGDYPRHLENILTILSEVLSFFPAGSAQAASMLLTLLKASILTLRASG
VDIRPQTEESVENVEGLIKHLQVKSREGTLRSNKDTYALLTTADEEMQQDFRAIPIYPTP
EEFQQEQRPFLRPNLTSQRYTSTHLYLDTHFRLLREDFVRPLREGIQQLLQSQTEKGGGE
GGRHGHLKAKQFDDIRVYFDTKLVVPKCTLSGMAYIIQFDVKPFKFVRWENSKRLIYGSL
VCLSCDNFQSFLYATVSERDPKTLQKGLVTIAFTEESRWKLAKIENDKSFLMVETTAYFE
AYRYVLDGLKELREDNLPFQRYIVECSKDVLSPDYLRRNDSYDLKSVAHPDHKCKVKPFH
SLAPDAWPGKEELGLDVSQMRAFQLALTKELTIIQGPPGTGKTYVGLKIARALLTNQALW
REAGDEAPMLVVCYTNHALDQFLEGIHTFLPEGIVRVGGRSNSEILKRFNLRELSRSPKF
KQRLPSRLSRVYGQVYKELCEVERWIQSQVTNLECSLKGILREGFLQNFISPRHWNSLQQ
SPSRGGVFRALEVKRSSLIMEWLGLNSTVLLQRETENANARPAAEESGDDLIAIAHEADL
ILAERFVEDNVSGRDGGSTADQGKDVRAVEELMLAMNLDEHEIQADQSEDGWEVQRSEKK
RLKNQIKAELKKTTTMTELEERAVLNIWSLSQPDKWRLYRSWVARYREEIRNKIQGSEEE
YQNAVDRLADVKRHENICLLKGAKVIGMTTTGAAKFRSVLQSVCPRIVIVEEAAEVLEAH
TITTLSKECQHLILIGDHQQLRPSATVYELARNFNLEMSMFERLVKMELPYVRLDYQHRM
RPEIACLLTPHIYAELENHPSVFEYENIKGLDTNLFFVEHENLEEEIKEGKSHQNQHEAQ
FVVALCRYLILQGYKPEQITILTTYTGQLYCLRNLMPASQFAGVKVHVVDKYQGEENDIV
LLSLVRSNRQGKAGFLSIPNRVCVALSRAKKGLYCIANCSMLGQVKLWGNIFQTLREKAQ
IGNALTLCCQNHPDRRVKASHAADFKLAPEGGCTKPCEFRLDCGHVCSRLCHPCDPEHKE
YRCVKKCEKVLCDLGHKCPLACFEKCPKCAVRVEKVVPRCEHAQMVPCHQDPETFSCREP
CEKLLECGHPCGALCGEPCTPLCRVKVPLQLRCGHGQLDACFYKTHPLEPECRAPCKKEL
KCGHACSGSCGRCFQGRYHSACRQRCERLLICSHKCQEPCPVACPPCRKPCENRCVHSKC
TKPCGLPCAPCIEPCAWQCPHHRCGKLCHEPCDRPPCDRPCAKALDCGHPCIGLCGDKCP
GKCRVCDRDEVTEIFFGTEDEPEAHFIQLEDCGHLVEYTAMDHFMGMDADQAAKNGEEVA
IKLKECPKCKCPIRKNLRYGSHINSRLAEIEMVKVKISGREADIDKQRRALQRRCAENHH
LHEFQCHLDDLQIPDKLEEKHLTAKDLWILENRIEFLLRVAKLKKVQREKLPAIQSLPFG
ERVEEFLQWLNHRSQSFTEQQVFDLQRELQRITSLAELNLRCQEAQARGQRNAIQAEVQA
TTAVLEKRGQFTEQDEERVREAMERLGEKLPRTGLGIGEEERKMIVSAMKMQPGHWFKCP
GGHVYAITECGGAMESRDCPDCKAPIGGANHSLASGNQVASEMDGAQHAAWSEASNLANF
GQLDL
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atggagaggccgactggtgatgatgatggggttcctttgcccgcagcagcagcacgaggc
aaaggaaggggaataagaggaggaggacgaggatggggaggaggaggaggaagaggagca
gcagggaaaggatggggaggaggagaaggagcagcagcaggaaaagggtggggaggagga
agagggggagcagcagggaaaggatggggaggaggaggaggaggaggaggagcagcaggg
aaaggatggggaggaggagaaggagcagcagcaggaaatgggcggggaggaggaagagga
ggaggagcagcagcagggaaaggatggggaggaggagaaggagcagcagcaggaaatggg
cggggaggaggaagaggaggaggaggagcagcagcaggaggaggaaggggattcggagga
gcagctgctgcaggaggaagaggaggagactccacgggtcgacctcatggccgtggactg
gactttaaaaccctagaggagctctctggaaatgatccgtacgtagtggccatcgcgctg
tccgctcacccggccctgaaagaggtcgtgtctgcgaccgaaatgtcgaagaactacatc
gagctcctctgcctgctgctgagtaaatccttcaagtcgcaggcagacaggagcacgcgg
cagcacctggccggcaccataagagattccggtttcttccgcaccgtcctgccccactac
gtggggggcatggggtcagagtccaacgccaaccgcctaggggactacccgcggcacctg
gaaaacatcctgactattctgtcagaggtcctcagcttcttccccgccggctcggcccag
gccgcgagtatgctgctgactctgctcaaagcctccatcctcaccttgagggcgtcgggg
gtggacatccggcctcaaacggaggagagcgtggagaatgtcgagggcctgatcaagcac
ctccaggtgaaatccagggagggaacccttcgctccaacaaggacacttatgccctgcta
accactgcagatgaagaaatgcaacaggatttccgggctatacccatctacccgacaccg
gaggagtttcagcaggagcagaggcccttcctgagacctaacctcacctctcagcgctac
accagcacccacctctacctagacacgcacttccggctgctgagagaggactttgtgcgc
ccgctccgcgaggggatccagcaactgcttcagagccagacggaaaagggagggggcgaa
ggagggcgacatggtcacctgaaagccaagcagtttgatgacatcagagtgtactttgac
acaaaactggtggtgcccaagtgcaccttgtccggcatggcttacataatccaatttgac
gttaagccattcaagtttgtgcgctgggagaactccaagaggctgatctatggttccctg
gtctgcttgtcgtgtgataattttcagagcttcttgtatgccacagtttctgaacgggat
cccaaaaccctgcagaagggactggtcacgattgccttcaccgaagagagcagatggaag
ttggccaagattgagaatgataagtcgttcctaatggttgagaccactgcgtactttgag
gcttatcgctacgtcctcgatggtctgaaagagctgagggaggacaacctgcccttccag
aggtacatcgtggagtgcagcaaggatgtgctctccccagattatctgcgaaggaacgac
tcttacgacctgaagtccgttgctcaccccgaccataagtgcaaggtgaagccctttcac
agcctggcgcctgacgcctggccaggaaaggaggagctgggcctggatgtgtctcagatg
agagccttccagctggccctcacaaaggagctcaccatcatacagggacctcctggcact
ggaaaaacctacgttggccttaaaattgctcgggccctgttgaccaatcaggctctgtgg
agagaggcaggagacgaagctccaatgctggtagtgtgttacactaaccatgccctggat
cagttccttgagggtattcacacatttctgccggaaggaatagtgcgcgtcggagggcgc
agcaacagcgagatcctgaagcgcttcaatctgagggagctgtcccgctcgcctaagttc
aaacaaaggctgccgtctcgactgagtcgcgtctacggtcaggtttacaaggagctgtgt
gaggtagagcgatggatccagagtcaggtcaccaatctggagtgttctctgaaaggcatc
ctgcgggaaggcttcctacagaatttcatctcacccagacactggaacagtctgcagcag
agcccatctagagggggagtttttcgggcgctggaggtgaagaggagcagtctgatcatg
gagtggttgggcttgaactccaccgtcctcctgcagagggagacagagaatgcaaatgca
cgtccagctgccgaggaatcgggggacgacctcattgccatcgcacacgaggcagacctg
atcctggcggagcgcttcgtggaagacaacgtcagtggcagagacggcggcagcaccgcg
gaccaggggaaggatgtccgagccgtggaggagctgatgctggccatgaacctggacgag
cacgaaatccaggctgatcagagcgaggacggatgggaggtacaacggtccgagaagaaa
aggttgaagaaccaaatcaaggccgagctgaagaagaccaccaccatgactgagctggag
gaaagggctgtcctgaatatttggagtctcagccagccagacaaatggagactctatcgc
tcatgggtggctcgctacagagaagagattcgtaacaaaatccaagggtccgaggaggag
tatcagaacgcggtggaccgcttggctgatgtaaagcgccacgagaacatctgtctgctc
aagggagccaaggttatcggcatgacgacgacgggggcagccaagttccgtagcgttctg
cagagcgtttgtccgcgtatcgtgatcgtggaggaagctgcagaggttctggaggctcac
accatcaccacgctgagcaaagaatgccagcacctcatcctcatcggagaccaccagcag
ctgcgccccagtgccacagtgtatgaactcgctaggaactttaacctggagatgtccatg
tttgagcggctggtgaagatggaacttccttacgtcagactcgactatcagcatcgtatg
aggcctgaaattgcctgtcttctgaccccccacatctacgccgagctggaaaaccatcca
tcggtttttgagtatgaaaacatcaagggcctagataccaatttattcttcgtggagcat
gaaaacctagaagaagagatcaaagaagggaaaagccatcagaaccaacatgaagcacag
tttgtagtcgctctttgtcgctatctcatccttcaggggtacaaaccagagcaaattacc
atcctcacaacctacaccgggcagctctactgcctgcgcaacctcatgcctgccagccag
ttcgccggggtcaaagttcacgtcgtggacaaataccagggagaagagaacgacattgtt
ttgctgtctctggtccgcagcaaccggcagggtaaagctggctttttaagcattcccaat
cgcgtctgtgtcgccttgtctcgggccaagaaaggcctctactgtattgccaactgctca
atgctgggccaggtcaaactctgggggaacatcttccaaaccttgagggaaaaggctcag
attggaaacgccctgacgctatgctgccagaatcatcccgaccgacgcgtgaaggcgtct
cacgccgccgatttcaaactggcgcccgagggaggctgcacgaagccctgcgagttccgc
ctggattgtggccacgtctgctcacggctgtgccacccctgcgacccggagcacaaggag
taccgctgtgtcaagaagtgcgagaaggtcctgtgcgatctgggacacaagtgcccgctc
gcgtgcttcgaaaagtgccccaagtgcgcggtgcgggtggagaaggtcgtgccgcggtgc
gagcacgcccagatggtcccgtgccatcaggacccggagacgttctcgtgccgggagcct
tgcgagaagctgcttgaatgcggccacccgtgcggcgcgctgtgcggagagccgtgcacc
cctctgtgccgggtgaaggtccccttacagctcaggtgcggccacggccaactggacgcg
tgtttttacaagacacacccactcgagcccgaatgcagggctccttgcaagaaggagctc
aagtgcggccacgcctgcagcgggagctgcggccgctgcttccagggccgctaccactcc
gcgtgccgccagcgctgcgagcgcctcctgatctgctcccacaagtgccaggagccgtgc
cccgtggcctgcccgccctgccggaagccgtgcgagaaccgctgcgtgcacagcaagtgc
accaagccgtgcggcctgccctgcgccccgtgcatcgagccctgcgcctggcagtgcccc
caccaccgctgcggcaagctctgccacgagccgtgcgaccggccgccgtgcgaccgaccc
tgcgccaaggccctggactgcggccacccgtgcatcggcctgtgcggggacaagtgtccg
gggaaatgtcgcgtctgtgaccgcgacgaggtcacggagattttcttcggcacggaggac
gagcccgaggcgcacttcatccagctggaggactgcggccacctcgtggagtacaccgcc
atggaccacttcatggggatggacgccgaccaggcggcaaagaacggcgaggaggtggcc
attaaactgaaggaatgtcccaagtgtaaatgtccaatccgcaagaatctccgctacgga
tctcacatcaacagccgcctcgctgagatcgagatggtgaaggtaaagataagcggacgc
gaggcagatatcgataagcaaaggcgggcccttcaaaggcggtgtgcggagaaccatcac
ctccatgaatttcagtgccatctggatgatttgcaaatccccgacaaactggaagaaaag
cacctcacagcaaaggacctgtggatcctggagaacaggatcgagttcctcctaagagtt
gcaaagctgaaaaaggtccaaagggaaaaattgccggcaatccagagcctcccgttcgga
gagcgcgtcgaggaattcttgcagtggctgaatcaccggagccaaagtttcacggagcag
caggtgtttgacctgcagagagagctacagagaatcacctcgctggccgaactcaacctc
cgttgccaggaggcacaagcgagagggcaacgcaacgcaatacaagccgaggttcaagca
acgacggccgtcttggagaagcgaggccagttcacggagcaagacgaggagcgcgtgagg
gaagccatggagcggctcggcgagaagctcccgcgcacgggcctgggcatcggcgaggag
gagaggaagatgatcgtctcggcgatgaagatgcagcccggccactggttcaagtgtccc
ggcggccacgtttacgccatcaccgagtgcggaggcgccatggagagccgcgactgcccg
gactgcaaggcccccatcggcggggccaatcacagtctggcgagcggcaaccaagtggcc
tcggagatggacggcgcgcagcacgccgcctggtccgaggccagcaacctcgccaacttc
ggtcagctggacctctga
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