Pungitius pungitius (ninespine stickleback): 119193886
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Entry
119193886 CDS
T07626
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119193886 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119193886 (smarcd1)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119193886 (smarcd1)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119193886 (smarcd1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119193886 (smarcd1)
PBAF complex
119193886 (smarcd1)
GBAF(ncBAF) complex
119193886 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
119193886
NCBI-ProteinID:
XP_037303683
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MAARGGFQSAPSGGGGGAMGPGPPVPGAGPGMGPGTPTGRMIPSSAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPNMGPPGYGNSPVSRPVMPGVMDPSRKRPAPQQIQQVQQQNRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLNFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELETALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagtcagcacctagtggcggcggtggaggagctatggga
cctggaccaccggtaccgggcgcaggaccaggcatgggacccgggactcctacggggaga
atgataccttcgtctgccgcgcagaaccacatgtaccgctccccgatgcccgggcccggg
tacccgagaccaggcatgcctccatccagccgcatgacgccacagggacccaacatgggc
cccccgggatacggcaacagcccagtgtctcgccccgtgatgcccggcgtgatggacccg
tctcgcaagaggcccgccccccaacagatccaacaggttcagcagcagaaccgcaaccag
cacacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaactggtc
ccagagtctcaggcttacatggatctgctagcatttgagaggaagctggatcagaccatc
atgcgcaagaggctggacattcaggaggccctcaagaggcccattaagcaaaagcgaaag
cttcggatcttcatatcaaacaccttcaaccctgcgaagcccgatgcggaggatggagag
ggcacagtggcatcatgggagctacgtgttgagggccgtctgctagaagatacggctgtc
tccaaatatgaagccaccaaacagaagcggaagttctcctctttcttcaagtctctggtg
atcgagttggacaaggacttgtacggccccgataatcaccttgtggagtggcacaggact
cccaccacccaggagaccgatgggttccaggtgaagaggcccggcgacgtgggggtccgc
tgcaccgtgctgctcatgctcgactaccagccccctcagttcaagctggacccccggctg
gctcgtatgctggggattcacacccagaccaggcccgtcatcatccaggctctgtggcag
tacgtcaagacccacaagctccaggacccccacgagcgcgagttcatcaactgtgacaaa
tacctgcagcagatctttgagactcagcgaatgaagttctccgagatcccgcagcgctta
cacgctctcctgatgcccccagagcccatcatcatcaaccatgtgatcagtgttgacccc
aatgaccaaaagaagactgcttgctatgatattgatgtggaggtggacgacacgctgaag
acccagatgaactccttcctgctctccacagccagtcagcaggaaatagcaggactggac
aacaagatccacgaaaccattgagaccatcaaccagctgaagacccagagagagttcatg
ctgaattttgccagggatcctcagggcttcatcaacgactggctgcagtcgcagtgcaga
gacctcaagaccatgacggatgtggtaggaaacccagaagaggagcgcagagcagagttt
tactaccagccgtgggcccaggaggccgtctgtcgctacttctactccaaggtgcagcag
aggcgacaggagctggagacggcgctcggcatcaggaacacctga
DBGET
integrated database retrieval system
