Pungitius pungitius (ninespine stickleback): 119193901
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Entry
119193901 CDS
T07626
Symbol
nisch
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119193901 (nisch)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
119193901 (nisch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
PX
LRR_9
LRR_NXF1-5
LRR_6
Motif
Other DBs
NCBI-GeneID:
119193901
NCBI-ProteinID:
XP_037303705
LinkDB
All DBs
Position
8:2878499..2894179
Genome browser
AA seq
1515 aa
AA seq
DB search
MEPASFPEELSERKVCVVGSELVENYTVYVIEVSDGEHRWTVKHRYSDFHDLHEKLTAEK
KVDRGLLPPKKMLGKNSKSLVERRQKELELYLQTLLLQFPQSSPTPLASFLHFHLYEING
ITAALAEELFHKGELLLQAGEVFSLRPLQLYCVSQQLRLAKPTCCNGDAKTDLGHILDFT
CRLRYLKMSGSRGPVGTSNIQESSLPYDLSVFKALLQIEISECSSQQIRGLSSLRSSLAT
LSLHHSTETMMSILVPEASEFSQWEPEGAESGCPVTAVIPVWRNLTTLDMSHNGISTIDG
SVKLIPKVEFLDLSHNQLSTVENLQHLYNLVHVDLSYNSLRVLEAAHTRLGNIKTLSLAG
NQLDRLSGLSKLYSLVNLDLSHNQLAQLEEIRNIGSLPCLEKLNLSSNPMCIIPDYRTKV
LTQFGDRAAEVCLDGAVTSEKELDTVEVLKAIQKAKEVKDRMSSSDKKISEETKLSAAAA
PPHLSPPPSSSSRCSSADADAAPAVVSSSSSSSSSSCLAQQPACPSQEVTSGEEQDNTLP
RGVLPPGDAAPPPASINNKTRRLLPAAAAAQVQQAAVSLSEQTLCGAPTCVTATTTTNHF
CCVCCSSSPKPPETRCSSCSAASFPLLPSHLLFLSSSNKDFITQLSLRLSATLKEQKRET
EDEEEEEERDEERQDEKENGSESREVQSNVEDTEVESPSPGSVDGYFEMGLNDSVEESVC
SSSSTSLALPPAEEPGAHRGDLCGEEEAGQVTRVLWCYCLQVKKEVEHKEVCLVLTDRLL
GLLYLSADFTQTNQDTDQERSLLVEEVLSSLQVDLLLPYRHLLLSRTPDLPDSCLSFGLR
SGPTRWYLFSEGEELQRTRTELKVLMQAVKSEPEPPDSPWLLPRSLLSSWELEESRGAQG
GYPAFLLLSSSSSSTPGTHPLLSEGKDSSLPSLLFLTHKHLWVLKMDFRELAERERSSDA
LQPSSSSSSSGCRLVRVPLGSVVLHPRERASQVWDGTSNPSCPDPKHPHRRSHAVELLLA
GQRLLLLFPLAQNRSSFLGLLSQRRASLEGLKMVALPQTCRPCLRQGRLASRDQRCGSGS
RNSNNSLQVEENQPSLHLLPGLSPGLKLLAGLSEEQLLTYFHRYIAMSEAEEVRQVLWLS
VVLYKSPGCELTCCLLLSTDTIYFLLEDSASTLDHHSVLDAMDSGDPDVSLCCCLSVGLS
DLLSVNVGLFDQYFRVVGRSPHHIVCCLSRDSYGTGVFLQELMSSLSLLQQQLPPPEPSD
QDFYSQFTDTSTGKMQNYELVHSSKVKFIYPSEEEMGDLTFIVAERKAAGSAPSSSSSSS
SSSSRSFNVLLYLLVFQVQTPCGLPVHGSALSGPSPSGPSPPGSAPSPVLQPRTLILTST
DVFLLEEDYVSYPLPDFAKEPPSRDRYQLREARRIRDLDRVLLGYQTYPQALTLVFDDLP
GPDLLCHLTMDHFATAGGREEAPPGGGGGASSGAEGEVQWCVFVPEAESRERLISLLARQ
WEALCSRELPVELTG
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgcatcctttccagaagagctttcggagaggaaagtgtgtgtcgtcgggtcg
gagctggtggaaaactacactgtctatgtcatcgaggtgtcggacggggagcacagatgg
acagtgaagcaccgctacagcgacttccacgatctccacgagaagttgacggcagagaag
aaagtggaccgagggctgcttcctccaaagaagatgttggggaagaactccaagagtctg
gtggagcggcgtcagaaggagctggagctctacctgcagacgctcctgctgcagttcccg
cagagctcgccgactccgctggcctccttcttgcactttcacctctacgagatcaacggc
atcacagccgcgctggctgaggagttgtttcataaaggcgagctgctgctgcaggccggt
gaggtgttttccctccgaccgctgcagctctactgcgtctcccagcagctccgcctggcc
aagccgacctgctgcaacggagatgccaaaaccgacctggggcacatcctggacttcacc
tgcaggctgcgatacctcaagatgtcgggaagcagaggcccggtgggaaccagtaacatc
caggagagcagcctcccgtacgacctgtccgtcttcaaagcactactccagatcgagatc
agcgagtgcagctctcagcagatccgaggtctgtcgtctctgaggtcgagtctggccact
ctgagtctccaccactccacggaaaccatgatgtccatcctggtcccagaggcgagcgag
ttctctcagtgggagcctgagggggcggagtctggctgtccggtcaccgccgtcattccc
gtgtggaggaacctgaccacgctggacatgagccacaacggcatcagcaccatcgacggc
tcagtgaaactgattccaaaggtggagtttctggatctgagccacaaccagctgtccacc
gtggaaaacctccagcacctgtacaatctggtccacgtggatctgtcctacaacagcctg
cgggtcctggaagcggctcacacccgtctgggcaacatcaagactctgagcctggccggc
aaccagctggaccgactgagcggcctcagcaagctgtactcgctggtcaacctggacctc
agccacaaccagctggcccagttggaggagatcaggaacatcggatccctgccgtgtctg
gagaaactcaacctgtccagtaaccccatgtgcatcatcccggactacagaaccaaagtg
ctgacccagtttggagaccgcgcagcagaggtttgtctggacggtgcggtgacctctgag
aaggagctggacacggtggaagtgttgaaagcaattcagaaagccaaagaagtcaaagac
cgaatgagcagcagcgacaagaagatcagtgaggagaccaagctgtccgctgctgctgca
cctcctcacctctcccctcccccctcctcttcctcccgctgctcctctgctgatgctgat
gctgctcctgcggtggtctcctcttcctcctcctcctcttcttcttcatgcctggcccag
cagcctgcctgccccagccaagaggtgacgagcggagaagaacaagacaacacccttccc
cgcggcgtcctccctcctggggacgctgctcctccccccgcgagcattaacaataaaaca
cgtcgtctcctgcccgctgccgccgccgcccaggtacaacaagctgctgtcagtctgtct
gagcaaaccctctgtggagctcctacatgtgtaactgcgaccactactaccaaccacttt
tgctgtgtctgctgctcttcctctccaaaaccacctgaaaccaggtgctcctcctgcagc
gctgcctcgtttcctctgcttccttctcacctgctcttcctctcctcctccaacaaagac
ttcatcacccagctctccctccgcctcagcgccaccctgaaggagcagaagagggagacg
gaggatgaagaagaggaggaggagagggacgaggagaggcaggacgagaaagaaaatggg
tctgaatccagagaggttcagtccaatgtggaggacactgaggtggaaagtccaagtcca
ggctccgtggacggatacttcgagatgggtctgaatgactccgtggaggagtcagtctgc
tcctcttcctccacgtctctcgcccttcctcccgcggaggagcccggggcccaccggggg
gatctgtgtggcgaggaggaggcagggcaggtcaccagggttttgtggtgctactgtctt
caggtgaagaaggaggtggagcataaggaggtgtgcctggtgctgactgaccggctgttg
ggcctcttgtacctgtcagctgacttcacacagaccaatcaggacacagaccaggagcgg
agtcttctggtggaggaggtgctgtccagcctacaggtggacctcctgctgccgtaccgc
cacctccttctctcccgcacccccgacctccccgactcctgcctctcattcggcctccgg
tccggtccgacccgctggtacctcttctccgagggggaggagctccagcgcaccaggacg
gagctgaaggtgctgatgcaggctgtgaagtctgagccggagcccccagactccccttgg
ctcctcccccgatcgctcctcagctcctgggagctggaggagagtcggggagcgcaggga
ggctatcctgccttccttctcctctcctcctcctcttcctccaccccgggcacccacccg
ctcctctcagaggggaaggactccagcctcccctccctcctcttccttacccacaaacac
ctctgggtgctgaagatggactttagagagctggcagaaagagagaggagcagcgatgcc
cttcagccctcctcctcttcctcttcctccgggtgcaggctggtccgcgttcccctcggc
tccgtggtgcttcaccccagagagagagcttctcaggtgtgggatggaaccagcaaccct
tcctgccccgacccaaagcacccccacaggaggagtcacgcggtggagctgctgctggct
ggtcagaggctgctgctgctcttccctctggcccagaacaggagctccttcctggggctg
ctgagccagaggagagcgtctctggaggggctgaagatggtggccctgccccagacctgc
aggccctgtctccggcaaggccggctcgcatccagagaccagcgctgtggttccggttcg
agaaactccaacaatagccttcaggtggaggagaatcagccctcccttcacctcctccca
ggtctctccccgggactgaagcttcttgccgggctcagcgaagagcagcttctgacctac
ttccacagatatatagcaatgtctgaggcggaggaggtgagacaggtcctctggctgtct
gtggtcctctacaagtctccagggtgtgagctcacctgctgcctgctgctctccacggat
acaatctacttcctgttggaagactccgcctccacactcgatcatcactcggtgttggac
gcgatggactcgggagacccggacgtcagtctgtgctgctgtctgtccgtcggactgtcc
gacctgctgtctgtcaacgtgggacttttcgaccagtacttcagagtggtgggccggtcg
ccccatcacatcgtgtgctgtctcagccgggacagctacgggacgggcgtcttcctgcag
gagctcatgtcgtccctcagtctgctgcagcagcagcttcctcctccggagccgtcggat
caggacttctactcccagttcaccgacaccagcaccggaaagatgcagaactacgagttg
gtccacagcagcaaggtgaagtttatttaccccagtgaggaagagatgggagacctgacc
ttcatcgtggcagagaggaaggctgcaggcagcgcgccatcgtcctcctcctcctcctcc
tcctcctcttcccgctccttcaacgtcctgctgtacctgctcgtcttccaggtccaaacg
ccctgcggtcttcccgtccacggcagcgctctctcaggcccctccccctcgggcccctcc
cccccgggctccgctccgtctccggtgctccagcccaggactctgatcctgaccagcacc
gacgtgttcctgctggaggaagactacgtcagctaccctctgccggatttcgccaaagaa
ccaccttccagggaccggtaccagctgcgcgaggctcggaggatccgggacctggaccgg
gtcctgctggggtaccagacttaccctcaggctctcaccctggtcttcgacgacctgccc
ggccccgacctgctctgccacctcaccatggaccactttgccaccgcgggggggcgggag
gaggccccgcccggaggggggggcggagccagcagcggcgcggagggagaggtccaatgg
tgcgtcttcgtcccggaggcagagagcagagagcgcctcatctccctcctcgcccgccag
tgggaggcgctgtgcagccgggagcttccggtggagctcacggggtga
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