Pungitius pungitius (ninespine stickleback): 119194009
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Entry
119194009 CDS
T07626
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119194009 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119194009 (lrrn1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_9
Ig_3
LRR_1
ig
Ig_2
LRR_EndoS
fn3
V-set
LRR_Zer-1
Pur_ac_phosph_N
Peptidase_M73
Sp38
Baculo_ODV-E27
Ig_C17orf99
Fn3_ELFN
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
119194009
NCBI-ProteinID:
XP_037303885
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All DBs
Position
8:13036211..13045699
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AA seq
716 aa
AA seq
DB search
MARRRLDCLLPGQVFAGLMLVSIGLSFQSNECPQLCVCEIRPWFTPQSTYREAITVDCND
LRLTRIPGNLSSDTQVLLLQSNYIARTNDELEQLFNLTELDLSQNNFSSIRDVGLFNMSQ
LTTLHLEENQITEMPDYCLQDLSNLQELYINHNQINTISDNAFYGLHNLLRLHLNSNKIR
TIGSRWFQSTPNLEILMIGENPVVGIIDFNFKPLGNLRSLVLAGMDLTDVPGNAFVGLDN
LESLSFYDNKLVRVPQRALQKLPNLKFLDLNKNPVHKIQEGDFKNMLRLKELGINNMGEL
VSIDRYALDNLPELTKLEATNNPKFSYINRQAFRDVAALESLMLNNNALNALYQSTVDSL
PNLREISIHSNPLRCDCVIQWMSSNRTTVRFMEPLSMFCAMPTEVRGLHVREVLQNNLAN
QCLPLIAHDTFPSHLNLDIGMTLDLDCRAVSQPEPEIYWVTPMGNKVTTDTLSDKFTLSN
EGTLRITHIQVQDSGRYTCVAENSEGADTRVAALRVNGTLFDSTQLMKIYVKQTESHSIL
VSWKINSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLTVSN
VHQQTQKSCVNVTTKPAAFAVEISDQGTNTALAAVMGTMLAIISLASLGVYVAKRWKRKN
YHHSLKKYMQKTSSIPLNELYPPLINLWETDSEKEKEGSSETKPSQVDTTRSYYMW
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacggaggttggactgcttacttccgggccaggtgtttgctggcctgatgctg
gtgtcaataggactatccttccagagcaatgagtgcccccagctgtgtgtctgcgagatc
cggccatggtttaccccccagtccacctaccgagaggccatcactgtggactgcaatgac
cttcgcttaactcgtatcccaggaaacctctccagtgacactcaggttcttcttctacaa
agcaactacattgccaggaccaatgacgagctagagcagctcttcaacctgactgagctg
gacttgtcccagaacaacttcagtagcattcgagatgttggcctcttcaacatgtcccag
ctcaccacgcttcatctggaggagaaccagatcacagaaatgccagattactgtttgcag
gacctcagcaacctgcaggagctctacatcaaccacaatcagatcaacacaatctctgac
aatgccttctatgggctccacaacctgctcaggcttcacctcaattccaacaaaattagg
accattggcagcagatggtttcaatccacacccaacctagagatcctcatgattggggag
aaccctgtggttggaataattgactttaatttcaagccattgggcaatcttaggagtctg
gttttggcggggatggatttgacagacgtacctggaaatgcctttgtgggacttgacaat
cttgaaagcctctctttctatgacaacaagcttgtccgagttccccagagagccctacag
aaactacctaacctcaagtttttggatttaaacaaaaacccagtgcacaagatccaggaa
ggagatttcaagaacatgctgagactgaaggaactgggtataaacaacatgggcgagctg
gtttctattgaccgctacgcacttgacaatcttcctgagctcacaaagctggaggctaca
aacaatcccaagttctcttatattaaccgccaggcctttcgtgatgtcgctgctctggag
agtctaatgctgaacaacaacgccctgaatgctctctatcaatccacggtggactctcta
ccaaatttgcgtgagatcagcattcacagcaatcctctgcgctgtgactgcgtcattcag
tggatgagctccaacagaaccacagtccgtttcatggagcctctgtccatgttttgtgcc
atgccaacagaagtaaggggtttacatgttcgggaggtgctgcagaacaatttggcaaac
cagtgcctgcccttgattgcccacgatactttcccaagccacctcaacctggacatcggc
atgaccttggacttggactgcagagctgtgtcccagcctgaacccgaaatctactgggtg
acgccaatggggaacaaggtaacgacggacaccttatctgacaagttcaccctcagcaat
gaaggtacattgagaattactcacatccaggtacaagactctggccgatacacctgtgtg
gctgagaattccgaaggcgcggacacaagagtggcggctttacgggtgaacggcactctt
tttgacagcactcagctaatgaagatctacgtcaaacaaaccgaatctcactccatactg
gtctcctggaaaataaattccaacgtgatgacctccaacctcaagtggtcatctgccaca
atgaaaatagacaacccacatattacttacactgccagggttcccgttgatgtccacgag
tacaacctcacgcatctacaaccagcgactgagtacgaggtgtgcctcacggtctccaac
gtccaccaacaaacacagaagtcgtgcgtgaatgtgacgacgaagccggcagcttttgct
gtggaaatatctgaccaagggaccaacactgctctcgctgcagtcatgggaaccatgtta
gcaatcatcagtctggcctctctgggagtgtacgttgccaagaggtggaagaggaaaaac
tatcaccattctctgaaaaagtacatgcagaaaacctcgtcaataccgctgaacgagttg
tatccgcccctcatcaacctgtgggagacggacagtgagaaggagaaagagggctcgtcc
gagaccaaacccagtcaggtggacaccacacgcagctactacatgtggtga
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