Pungitius pungitius (ninespine stickleback): 119194020
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Entry
119194020 CDS
T07626
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppug03009
]
119194020 (shq1)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
119194020 (shq1)
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GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
RRN3
Motif
Other DBs
NCBI-GeneID:
119194020
NCBI-ProteinID:
XP_037303934
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Position
8:12639674..12659122
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AA seq
594 aa
AA seq
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MITPAFDLSQEPEFLILSIRVPYTRTSEFDLYIDGTDLKFFAKPYFLRLSLPGRIVEDGR
EKAKFDIDAGLVTLRVPKETAGEHFEGLQMLTSLLAPKGARSAKPLIEDLSPGESRPRLP
PTGVPLKLTAAALPSTEGAEDDDEEDFDWQMEQEVYKETSEEELGALQKYGFGNQRCGVF
ARLQEELSDVIDLKNPEGATADERRRGRLDAEASAFSPDHYLADLFEDAEIKELLKFRPW
WEKLTEQEGQAAVSFTDDEKEQLRKFTNRSYLLDKASLHQAWLGLVDILLAYCYEARSTE
GEHNVESPWTIRKLSGTLCWLETYSSLHDVLLSFGRRVLCYPLYRHFAMASAAVRDATKI
LQTGKACVLRGLLDIHRVFRENDPAYILNDLYITDYCVWIQRVKSKKMSALAETLQKASL
QKKDLGLELDELEEAAAMVAEEDEDDDDDDEEDGVASDCALISGSDSSSSSSDSSDESEE
SEGQSCTESNEGGGGGAEGGGASKDNPPQPQPISAASPVPRAPTGPLLPASQVSSLLIQE
LGERVEEELRISPGADRPSGSGSIGGTLLEPSPRRNPLLIVTTPQEGEDGAVGP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatcactcctgcgttcgacctgagccaggagccggagttcctgatcctcagcatccgt
gtgccctacaccagaacatcagagtttgacctctacatcgacggaaccgatttaaagttc
ttcgccaagccctactttctcagattgtctcttcctggcagaatagtggaagatgggaga
gaaaaggccaagtttgacattgatgctggtcttgtcacgctgcgggtgccaaaggaaaca
gctggagagcactttgaagggctccagatgctgacgagcctcctcgcccccaaaggcgcc
cgctcagcaaaaccactgatcgaggacctgagcccgggtgagtcacgtccacgcctccct
ccgaccggagtcccactcaaactgaccgcggctgctctgccctccacagaaggcgctgag
gatgacgatgaggaagactttgactggcagatggagcaggaggtgtacaaggagacctcc
gaggaggagctgggggctctgcagaagtatggctttggcaaccagaggtgtggagtgttt
gccagattacaggaggagctgagtgacgtcatcgacttgaagaacccagagggagcgacg
gcagacgagaggaggcgggggcggctcgacgcagaggcgtccgccttctcccctgaccat
tacctggctgatttgtttgaggatgctgagataaaggagctgctgaagttcaggccctgg
tgggaaaagctgacggagcaggaggggcaagcggccgtgtctttcaccgacgacgagaag
gagcagctgaggaagttcaccaaccgctcgtacctgctggacaaggcgtcccttcaccaa
gcgtggctcggcctcgtggacatcctgctggcctactgctacgaagctcgctccacggag
ggagagcacaacgttgagtccccgtggaccatcagaaaactcagtgggactctgtgctgg
ctggagacttacagctcgctgcacgacgtcctgctgtcgtttggacggagggtcctgtgc
tacccgctctacagacacttcgcaatggcctccgcagccgtccgtgacgcaactaagatt
ttgcagacagggaaggcctgcgtcctccgaggcctgctggatattcacagagtgttccgg
gagaacgatccagcctacatcctgaatgatctgtacatcacagactactgcgtctggatc
cagagggtcaagtccaagaagatgtcggccttggccgagacgttgcaaaaagcctccctg
cagaaaaaggatttggggctggaactggatgagctcgaggaggcagcagcaatggtggcc
gaggaagatgaggatgacgacgatgatgatgaagaagatggggtagcttccgactgcgct
ctgatatccggcagtgacagcagcagcagcagcagtgactcgtccgacgagagcgaggag
tctgaagggcagagctgcaccgagtccaacgagggaggagggggaggagcagaaggaggg
ggagcgtctaaggacaaccctccgcagccccaacccatctctgctgcttcccccgtcccc
cgagcacccacgggcccactcctccccgcctcgcaggtttccagcctgctgatccaggag
ctgggggagcgggtggaggaggagctgagaatctccccaggagcggacaggccgtcgggg
agcgggagcatcggggggactttgttggagccgagcccccgcagaaaccccctgctcatc
gtcacgacgccgcaggagggcgaggacggcgctgtgggtccctag
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