Pungitius pungitius (ninespine stickleback): 119194027
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Entry
119194027 CDS
T07626
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04514
Cell adhesion molecule (CAM) interaction
ppug04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119194027 (nfasca)
04517 IgSF CAM signaling
119194027 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119194027 (nfasca)
Cell adhesion molecules [BR:
ppug04515
]
Immunoglobulin superfamily
L1 family
119194027 (nfasca)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_PDGFR_d4
BiPBP_C
Fn3_ROS1
MUC7
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
119194027
NCBI-ProteinID:
XP_037303944
LinkDB
All DBs
Position
8:9690880..9793640
Genome browser
AA seq
1384 aa
AA seq
DB search
MLGQGGHRVLALMSLVLTLWHEAAPIEVPQDPKILQDLKQPPTIVKQSVKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
ATNDLGVALSNKILLRVSKAPLWPKEVLEPVVVPEGNSLVLNCSPPPGLPPPFTFWMNSA
MTPIPQDKRVSMGLNGDLYFSNVLTKDAHTDYSCNARFLFTHTIQQKNPFTLKVLTKEPY
NDTSYNATDTYGGRKVAESTPTFLSPSGSESSKMVLRDEQLLLECIAAGLPTPTIKWFKK
GGDLPGRKVKFDNYNKTLKIINVSEEDAGEYVCMANNHLGSIRHSIFVQVKAAPYWLDKP
SNVVLAPEENGRLVCRANGNPKPNIQWLINGQPIESTPHSTSRQMFGDTIIFRSVQMGSS
AVYQCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVIENNRTFLDCPFFGSPLPELR
WFKNGQGSGLDGGHYSIHINGTLEIKRAKAEDEGTYTCVANSMLGKAENQVRLEVKEPTR
IIRAPERQSAVRGSVARFECKVKSDPSLPITVAWTKDDKPLALRWRLQKDEESLTISDVN
EEDEGTYTCAVTSEIDQDSASARLTVLEEASLNPSVSSALPPDHPDPPMDLDLSDPAARS
VRLTWIPGNDHRSPVTQFLVQFEEDRWEPGRWQDLSTYPGDLNSVILQLAPFVNYQFRVI
AINAVGRSQPSRPSPRYKTSGAAPDAIPRGLRGWGSKKDNMEITWEPLLDLERNGPNLHY
SVWWRRKDLGEGWSNVTTVGSKHVVHNTETYISYEIKVQARNEFGQGPESNVVVGYSGED
KPIYAPTDLRVSKFDSTKAVLHWKPVDLSSVQGEFKEYRLYFWRESSLVPGLVVSKEKKT
KGFYSIAAEPSGILSDLVPYSRYKMFLVVANNLFESPPSNTVEVTTHEGVPDAPKFFRIN
RRTFDTIHLEWDKPLEPNGILIGYQLKYQIVNGSRVGRAQLETLPPNVTQFNVRLPERST
RYKFYLSALTQVGAGEVYAEESPHFANEENLTDSTVLVELTDASVASAFSPTPPPLAPLP
PTTMTPTTISTSTSATPTTSLPTTTATTPSTTTAATAEATTTTTTAELVTIKRTDQNVLV
AHGREIWNLTVEPNSNYANVSWRHNFPAGSSEFVLEFTLDSDKSVKVVPVKQQPPITVAD
LIAGAKYQLRVYSHELNSVSSKSFIFKTKPAYIDQVDIATQGWFIGLMCAIALIILILLI
VCFIKRSRGGKYPGGGCLTGFAKYLVRDKKDLPLDPVDQKDQDGSFDYHSDEDNKPLQGS
QTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAI
YSLA
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcaggggggccaccgagtcctggctctaatgtcattagttctgacactgtgg
cacgaagcagcacccatagaagtcccacaagacccaaaaatcctgcaagacctgaagcag
ccccccaccatagtcaaacagtccgtgaaggactacattgtcgaccccagagataacatc
atcattgagtgtgaggccaagggcaacccagtgccaacgttctcatggcgaaggaacgga
aagtttttcaacatcgggaaagatcccagggtgacaatgcggaaacgctctggaactcta
gagatcggtttccgtagcggaggacgaccggaggactatgagggggaataccagtgtttt
gccaccaatgaccttggagtggctctgtccaacaaaatcctgctgcgtgtctccaaggct
cctctctggcctaaagaagtgctggagccagtagtggtgcctgaaggcaactcgctggtt
ctgaactgcagcccaccaccaggcctgcctcctccattcaccttctggatgaacagcgct
atgactccgatccctcaggataagagggtttccatgggtctgaatggggacctttacttc
tccaacgttttgaccaaagatgctcacactgactacagttgcaacgctcgcttcctcttc
acacacaccatccagcagaagaaccccttcacactcaaagtcctgacaaaggagccgtat
aatgacacgtcttacaatgctactgacacctacggtggccgcaaagtagctgagtccacg
ccaaccttcctttctccctcggggagcgagagctccaagatggtgctacgggacgagcaa
ctgttgctggaatgcatcgctgctggacttccgacacccacgatcaagtggtttaagaag
ggtggggacctgccagggcgcaaggtgaagtttgacaactacaacaagaccctaaagatc
atcaacgtgtcagaggaggacgccggggagtatgtgtgcatggccaacaaccatttaggc
agcatacgccactccatctttgtccaggtcaaagcggctccttattggctcgacaaaccc
tccaatgtggttctcgctccagaggaaaacgggcgcttggtgtgtcgagccaacggcaac
ccaaaacccaacatccagtggctgatcaacggacagcctatagaaagcactccccacagc
accagcagacaaatgtttggtgacaccatcatcttccgctcagtgcagatgggaagcagc
gctgtctaccagtgcaacgcctccaaccagcacggctacctgctggccaacgccttcgtc
agcgtcctcgacatgcctccgaggatgctgggccctaaaaaccagctgatcaaagtcatc
gagaacaaccgcaccttccttgactgtccctttttcggttctcctctgccggaactacgc
tggtttaagaacggacagggcagtgggctggacggaggtcactacagcattcatattaat
ggcaccctggagatcaaacgggccaaagcagaggacgagggcacctacacctgtgtggcc
aacagcatgctgggcaaggccgagaaccaggtccgtctggaggtcaaagagccgacgcgt
atcattcgagcaccggagcgccagtcggccgttaggggatccgtggctcgctttgagtgt
aaggtgaagtctgatcccagcctgcccatcactgtggcttggaccaaggacgacaaacct
ctggccctgcgttggaggctgcagaaagacgaggagtcgttgaccatctccgatgtgaac
gaggaggacgagggaacctacacctgtgctgttacatctgagatagaccaggactcagcc
tcagcccgcctcacggtcttagaggaagcctccctcaacccctcagtctctagtgccttg
cctccagaccacccagaccctcccatggatctggacctgtcagaccctgcagcccgcagc
gttcgcctcacctggatccccggaaacgaccaccggagccctgtcacgcaattcctggtc
caatttgaggaggaccgttgggagccgggcaggtggcaggacctgtccacatacccaggg
gacctcaactctgtcatcctgcagctcgcccccttcgttaactaccagttcagggtcatc
gccatcaacgcagtgggccggagtcaacccagccggccctcgccacggtacaagaccagc
ggagccgccccagatgccatccccagaggtctacgaggatggggatcaaagaaggacaat
atggagataacctgggagcctctgcttgatctggagaggaacgggccaaacctgcactac
agcgtgtggtggagacggaaggatttgggagaagggtggagtaacgtgaccacagttgga
tccaaacatgtcgtccacaacacagagacctacatttcttacgagatcaaagtacaggcc
aggaacgagtttggacaaggaccagagtccaatgtggtagttggatactctggagaggac
aaacccatctacgctcccactgacctgcgggtgtcaaagtttgacagcacaaaggccgtc
ttgcactggaagcctgtggacctgagctctgtgcagggagaattcaaggagtaccgactg
tacttctggcgtgagtccagtctggttcctggtctagtggtcagtaaggagaagaagact
aaaggtttctacagcatcgcggccgaaccgtctggcatcctcagcgacctggtgccctac
tcgagatacaagatgttcctggttgtggctaacaacctctttgaaagtccacccagcaac
accgtggaggtcaccacccatgagggagtgcccgatgctccaaagtttttcaggattaac
cggagaacttttgacaccatccaccttgagtgggacaaacctctggagcccaacggtatt
ctgattggataccagctcaagtaccaaatagtcaatggttccagagtgggtcgtgcccag
ttggagactctcccgcctaacgtgacacagtttaacgtacgccttccggaacgatctaca
cgctacaagttctacctgtcagcactcacacaggtgggagcaggggaggtctatgctgag
gagtcccctcacttcgccaatgaagaaaaccttactgactccacagttctagtcgagctt
accgatgcctccgtggcttcagctttctctcctactcctcctcctctcgctcctcttcct
cctactaccatgactcctacaaccattagtacctcaacttctgccactccgacaacttct
cttcctactactactgctactactccttctacgaccaccgccgctacagccgaggcgacc
actaccacaacaactgcagagctggtcaccatcaagcgtactgatcagaacgtgttggtg
gcccatgggcgggagatctggaatctgacggtggagcctaacagtaactacgctaacgtc
agctggagacacaacttcccggccggcagcagcgagtttgtgctagagttcacactggac
agcgacaagtcggtgaaagttgtaccagtgaaacagcagccacccattacagtggcggat
ctgatcgctggcgccaagtaccagctgagggtttactcccatgagctcaacagcgtcagc
agcaaatctttcatctttaagaccaaaccagcctacatagaccaggtagacatagccacc
caaggctggttcattggcttgatgtgtgccattgccctcatcatactgatcctcctcatc
gtctgcttcatcaagagaagtcgagggggcaaatacccaggtggtggttgcttgactggt
ttcgcaaaatatctggtccgtgacaaaaaagatctccccttggacccagtagatcagaaa
gaccaggacggatcctttgattaccacagcgacgaggacaacaagcctctccaaggcagc
cagacatcgctggacggcaacgtgaaggaaagcgacgacagtctggtggactacggcgaa
ggcggcgacggccagttcaacgaggacggatctttcatcggccagtacacagtgaagaag
gacaaggacgagacggagggaaatgagagctctgaggccacctcgcctgtcaacgccatc
tactcgctggcgtag
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