Pungitius pungitius (ninespine stickleback): 119194112
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Entry
119194112 CDS
T07626
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145
Phagosome
ppug04540
Gap junction
ppug04814
Motor proteins
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119194112 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
119194112 (tubb1)
09142 Cell motility
04814 Motor proteins
119194112 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119194112 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119194112 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119194112 (tubb1)
04147 Exosome [BR:
ppug04147
]
119194112 (tubb1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
119194112 (tubb1)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
119194112 (tubb1)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119194112 (tubb1)
Exosomal proteins of colorectal cancer cells
119194112 (tubb1)
Exosomal proteins of bladder cancer cells
119194112 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Vein_beta-barrel
Motif
Other DBs
NCBI-GeneID:
119194112
NCBI-ProteinID:
XP_037304099
LinkDB
All DBs
Position
8:5570073..5572994
Genome browser
AA seq
472 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISEEHGINATGIYEGDSHVQLERINVYFNEAQGGKYV
PRALLVDLEPGTMDSVRGSRIGALFRPDNFIHGNSGAGNNWAKGHYTEGAELVDQVVDRV
RHESESCDCLQGFQLVHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLLENTDETFCFDNEALYDICFRTLKLTTPTYGDLNHLVCMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGIFRGRMSTKEVDEQMLAIQQKHSNNFVEWIPHNVKVAVCDIPPRG
LKMASTFIGNNTAIQEIFRRVGEQFALMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATTDVDFEAEDEEEEEGPSSTATTKVESRVEVKLETVTETGKEVE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgtacatttgcaaattgggcaatgtggcaaccagatcggctcaaagttt
tgggaagtgatcagcgaggaacacgggatcaatgccacaggcatctacgagggggacagc
cacgtccaactggagaggatcaacgtctacttcaatgaggcacaaggtggtaaatacgtc
cccagggccctgcttgttgacctggagcctggtaccatggacagtgtgagaggaagccgc
atcggagccctttttaggccggacaacttcatccacgggaactccggagctgggaataac
tgggcgaagggccactacacggagggggcggagctggtggatcaggtggttgacagagtg
aggcacgagagtgaaagctgcgactgcctgcagggcttccagctggtccactccctgggg
gggggcaccggctctggcatgggaaccctcctcatcaacaagatccgggaggagtacccc
gaccgcatcatgaacacgttcagcgtcatgccctcccccaaagtctccgacacggtggtg
gagccctacaacgccacgctgtcggtgcaccagctcctggagaacacggacgagaccttc
tgcttcgacaacgaggccctctacgacatctgcttccgcacgctgaagctgaccacgccg
acctacggggacctcaaccacctggtctgcatgaccatgagcggggtcacgacctctctg
agattccccgggcagctcaacgccgacctgaggaagctggccgtcaacatggtgcctttc
cctcgcctccacttcttcatgccgggcttcgccccgctgacggcccgcggcagccagcag
tacagggccctcacggtgcccgagctcacccagcagatgttcgatgcccgaaacatgatg
acggcgtgcgacccgaggaggggccgctacctcaccgtggccggcatcttccgcggacgg
atgtccaccaaagaggtggacgagcagatgctcgccatccagcagaaacacagcaacaac
tttgtggaatggatcccccataacgtcaaagtggccgtgtgcgacatcccgccccgaggc
ctcaaaatggcctccaccttcatcggcaacaacacggccatacaggagatattccggcgt
gtgggcgagcagttcgccctgatgttcagacggaaggcttttctccactggtacacagga
gaaggcatggatgagatggagttcaccgaggccgagagcaacctcaacgacctggtgtcg
gagtaccagcagtaccaggacgccacgaccgacgtcgatttcgaagcagaggacgaagaa
gaggaggagggaccctcgtcgacagcgacgacgaaggttgaatcacgggtagaagtcaaa
ctggaaacagttacggaaacgggcaaagaggtcgagtag
DBGET
integrated database retrieval system
