Pungitius pungitius (ninespine stickleback): 119194137
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Entry
119194137 CDS
T07626
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119194137 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119194137 (irf6)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119194137 (irf6)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119194137 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
119194137
NCBI-ProteinID:
XP_037304139
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Position
8:complement(13655394..13659684)
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AA seq
485 aa
AA seq
DB search
MAVTPRRVRLKPWLVAQVDSARYPGLVWIDREAMRFRIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLVFDGTKEIPMNPLKIYDVCDIPMPS
INQSSSEAGSWTPHEEDGVEEDIPDTPESLPPYPSNGTSPSPRIMWSPSSESQPSSCPPS
NELWPKEESVEVWPKEEPADVEMHPAVPPAPLPDHSMPQHPLTDTFFASPEMWISSLPMT
DLEVQFHYRGKEMCPTATVSNPQGCRLFYGDLGPMVNQEELFGPVNLEQLRFPSTEHITN
DKQRVFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPAAPNLIERQRKIK
LFCLESFLSGVISHQRGQTPSPPHFEINLCFGEEWPDGRPIERKLIMVQIIPVVARMISE
MFSGDNTRSFDSGSVRLQISIPDIKDNIVTHLKQLYCLLQTHQGQDGWALPPGPGLNIVQ
ALQAQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacccctcggcgggtccgcctgaagccctggctggtcgctcaggtggacagc
gcgcgatacccgggcctggtgtggattgaccgcgaggccatgcgcttcaggatcccgtgg
aaacacgccacacggcacacaccccagcacgaggacgaggacaccatatttaaggcgtgg
gccgtggagaccgggaagttccaagagggagtcgatgaacctgatcctgcaaagtggaaa
gctcagcttcgatgtgccctgaacaaaagcagagaattcaacctggtcttcgatggcacc
aaagagattcccatgaatcctttgaagatatatgatgtctgcgacatcccaatgccctcc
attaaccaatcctcctcagaggctggttcttggactccacatgaggaggatggtgttgag
gaggatattccagataccccagaatctctccctccatacccatccaacggcaccagtccc
tcccctcgaattatgtggtctccaagctctgagtcgcagccttccagttgtcccccttca
aatgagctctggcccaaagaggagtctgtcgaagtttggcccaaagaggagcctgcagat
gtggagatgcacccagcggtgcctcctgcaccgctgcccgatcactcgatgccgcagcat
cctttaactgacactttctttgcctctccagagatgtggatcagttccctcccgatgacc
gacctggaggtgcagttccattacagagggaaggagatgtgtcccacagcgacagtcagc
aatccgcagggctgcaggctgttctacggggacctgggccccatggtcaaccaggaggag
ttgtttgggccggtgaacctggagcagctacgctttccgtccacggagcacatcaccaac
gacaagcagagggttttcactaaccgcctgctggacgtgatggacagaggcctcatcctg
gaggtcagcggtcatgatatctatgcagtgcgcctgtgccagtgcaaggtgtactggtcc
ggtccctgcgcaccaaacccagcggctccgaatcttattgagcgccagaggaagattaaa
ctcttctgcctggagtcttttctcagtggagtaatatcccaccagcgtggccagacgcca
agccctccacactttgaaattaacctgtgttttggagaggagtggcctgatgggagaccc
atagagaggaaacttatcatggttcagatcattcctgtggtagctcgcatgataagcgaa
atgttctctggagacaacacgcggtcctttgacagtggcagcgttcgcctgcagatctcc
attccagacatcaaagacaacatcgttacccacctgaagcagctatactgcctgctgcag
acccaccagggccaggacggctgggcactgccccccggtccaggattgaacatcgtccag
gcgctgcaggcacaatga
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