Pungitius pungitius (ninespine stickleback): 119194138
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Entry
119194138 CDS
T07626
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein
KO
K10891
fanconi anemia group D2 protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119194138 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119194138 (fancd2)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
119194138 (fancd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
CCDC53
GRIN_C
Motif
Other DBs
NCBI-GeneID:
119194138
NCBI-ProteinID:
XP_037304140
LinkDB
All DBs
Position
8:complement(13937720..13951566)
Genome browser
AA seq
1439 aa
AA seq
DB search
MMRKKRRTSAGKGEGATSTTKAKKSRNTAPKPKEPAPEETNESVFCVFLREAGVTLKQAG
TSNEIAVDQIVFQKRLQKQLQKSPRYPGIVQEFTAGLESHIEDPERFRNCLLPCVPRLSD
ADSGNVSSFQESLLRMLLGIEMLQTLIINTLLEKLPEFMFDGVGDGGLNIPHTIINQFKW
LDRVVDSKELAAKLMELVSVAPVEVQRDIISSLPEILEDSQHNDIAKELNSLLQENTQIT
VPILDALSSLNLSSSLLTEVRGAVMVTLGAVQLEDLPVVVKFILHSVSASNAYEVVCNLR
KKLDLEQCVLPLALQASRSLIKSKGSAASASTPSAGSSQDSVTLILDGIKSAVRFQKTIS
EAWLKAIESVDEEEDHKVLDLLVLFILHSTNANQSRRGAERVLKVKVRSGFIQEVLLQRT
FSVYAQVMRGYFPSILALAQSLLRSPDPCVVPFGGHVYRHSFTAFDSYCQQEVVGSLVTH
VCSGVGGEVDMALELLCGLVTEKHSEMALYAVFVKGILDYMDNLTPQQIRRLFHLLSSLA
FGQQQQGSHIQDDMHIVIRKQLSSMVPKYKRIGIIGAVRIVGSMGAARLKRKESLPQETL
RQVTALLELVKSSIESSPEAAALYYDELANLMLSSTLDPQVQENIGKSVIDDFQVDFVAD
LGPEMSGSFPLPPRVMYDLEGQGSIAINLLPLLANDIKIKGEQQSQSTKAHRRVSPLGLC
PFFRLLRLCEHRLHQGDLEEIDGLLGCPLILTDMGVMEKMESLSKAEREFLCTLLFYTIN
WFREVINAFCEQKETEMKMKVMTRLQNITYLQTLLERALAVTPGYVPPVANFDGESTDGA
TLSSAAPVNKAKKDGAGKKRKASGKISSESGSQLDETTEADKTQQEQPEREVRQGVSLVS
YRPYFRELDMEVLNVLQCGLLSCSLLDSELHTKVREEVLLGPAELVFLLEDMHRKLEFGL
TAAPAKRTPFFKGRADKSLGFSHLQQRSAKDIASYCVQLLPALCSHLENCHNHFQTLLSE
NNGIVDGPATDVQEHNLMSSGYQLLLQVLNTTLSWSGFSQPGQRSLLKKALGVLAIRLKE
ESAELTLAQLVKHSFKYLVNFRSTMPSLSVALCLCQLLSTVSEKGGDPAAFREQTASLAK
QFLSQDWVTAAGEKERGNKFNEALHTLLRIYLVHVDDVLKAVEEIAGVGIPELLAASKDE
SSTSWPTLNRSTFLVFYKVLMAELEKAIRKIPAGNVSDNTEAQSEKLLTWNLAVRDFHVL
VNLVKVFDSRPVLNVCLKYGRLFLESFLKLGMPLLDNSFKRHMEDVQSLLKTFQLSTRQL
HHMCGHSKILQDTSLTNHVPALKKSLELFVYRVKAMLMLNNCQEAFWIGNLKNRNLKGEE
ILSQQSQGSDEDEDEDEEPRSPLPGDKSEVEAAETDSEESKAVNGEEDVDEDDVTDDSD
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtaaaaagcgacgcacttctgcgggtaaaggagagggagccacttcgaccacc
aaggcaaagaagagtcgcaacactgctcccaaaccaaaggaaccagctccagaggaaaca
aatgaaagtgtattttgtgtctttcttcgagaggcaggtgtaaccttgaaacaagctgga
acatcaaatgagatcgctgtcgaccaaatcgttttccaaaaaaggttacagaaacaactt
cagaagagtcccaggtaccctgggattgtgcaggaattcaccgctggactggagtcacat
attgaggaccctgagcggtttaggaactgtcttcttccatgtgtcccacgattgtctgat
gcagattccggtaacgtcagctcttttcaggaaagtctgctacgcatgctgttggggatc
gagatgctgcagaccctcatcatcaacactttgctcgagaaactccctgaatttatgttt
gatggtgttggagatggaggactcaacattcctcacacaattatcaaccagtttaaatgg
ctagaccgagttgtggacagcaaggagttggcagcgaagctcatggagctggtgtcagta
gcaccagtcgaggttcagcgtgacatcatcagcagcttgcctgagatactggaggactcc
cagcacaatgacatagctaaagagctcaactctttactgcaggagaacactcagatcact
gtccccatcctggatgccctctctagtttgaaccttagttcctcattacttactgaggtc
cgtggagctgttatggtcaccttgggtgctgtgcaactggaggacctacctgtggtggtc
aagttcatcctacattctgtctcagcctctaatgcatatgaggtggtgtgtaatcttcgt
aaaaagctggatttggagcagtgtgttctaccccttgcgctacaggcttctcggagcctc
ataaagagcaaaggatcagcagcttccgcttccacgccatcagctggcagcagccaagac
agcgttacattgattttggatggcatcaagtcagcggtgcgattccagaaaacaatatct
gaggcttggctcaaggcgatagagtctgtggacgaagaggaggaccataaggtgttagat
ctgctggtgctgttcatcctccactccaccaacgccaaccagagtcggcgcggggcagag
agggtgctgaaggtgaaagtgaggagtggattcatccaggaggttctactccagaggacc
ttcagtgtctatgctcaggtcatgcgggggtatttcccctccatcctggctctggctcag
agtctgttgcgctcccctgacccgtgtgtagtgccttttggtggacacgtgtaccggcac
tcattcactgcgttcgactcgtactgccaacaggaggtagtgggctccctcgtaacccac
gtgtgcagtggtgtgggcggggaggtggatatggccctggagctgctctgcggccttgtt
acagaaaaacactccgaaatggccctttatgcagtgtttgtcaagggaatcttggattac
atggacaacctcacaccccagcagatccgtagactcttccaccttctgagcagcctggca
ttcgggcaacagcagcagggatctcacatccaggatgacatgcacattgtgatccgcaaa
cagctctccagcatggtgccaaagtacaagcgcatcggcatcattggtgctgtcaggatt
gtaggaagcatgggggccgccaggctgaaaaggaaggagtcattaccccaggagacactc
agacaggtgacagccctgttagagctggtaaagtccagcatcgaaagctcgcctgaggct
gcagctctctactatgacgaactggccaatctgatgctgagctctaccctggacccgcaa
gtgcaggagaacattggaaagagtgtcatagatgacttccaggttgactttgttgcggat
ctcggaccagaaatgtcgggttcctttcctcttccgccgcgcgtgatgtacgacctggag
ggtcaggggagcattgccatcaacttgctgccactactggccaacgatatcaagatcaaa
ggagagcagcagagtcaatccacaaaggcccacaggcgcgtgtctcctctcggtctgtgt
ccgtttttccgcctcctgagactctgtgagcacagattgcaccagggagacctagaggag
attgacggcctcctgggctgcccgctgattctgacggacatgggcgtgatggagaaaatg
gagagcctgtcaaaagccgagagggaatttctctgtacgttgctgttttacaccatcaac
tggttcagagaggtcatcaatgcattctgtgaacaaaaagaaaccgagatgaagatgaaa
gtgatgacccgtctgcagaacatcacttaccttcagacactgctggagagggctttggca
gtaacacctggctatgttccacccgtcgccaactttgatggagaaagcacagatggggca
acacttagttctgctgctcctgtgaataaggcaaagaaagatggcgcaggaaagaaaagg
aaggccagtggcaagatttcctcagagagcggctctcagcttgacgagacaactgaagca
gacaaaactcagcaggagcaaccggagagggaggtccgccaaggtgtcagcctggtgtcc
tacagaccatatttcagggagctggacatggaagtgcttaatgtgctgcagtgtggcctg
ctgtcgtgttcactgctcgactctgagctccacaccaaggtgcgggaggaggttctgctg
ggtcctgctgagctggtgttcttgctggaggacatgcatcgcaaactggagttcggtctc
acagctgcccccgccaagagaactcctttcttcaagggaagggccgataagagcctgggc
ttctcccatctgcaacagaggagcgccaaggatattgcttcctactgtgtccagctgctg
cctgccctctgctcacacctggagaactgccacaaccattttcagacactgctgtctgag
aacaacggtattgtggacggacctgccacagatgttcaggagcacaatctgatgtcatca
ggctaccagctgcttctgcaggttctgaacaccactttaagctggtctggattcagccag
ccaggacagaggagcttactgaagaaggccttaggagttttggctatacgactaaaagag
gaaagcgctgagttgaccttggcgcagcttgttaaacacagcttcaagtacctggtgaac
ttccgcagcacaatgccaagtctcagcgtggccctgtgtctctgccagcttctatccact
gtgtcggagaaaggaggcgaccctgctgccttcagagagcagacggcttccctagcaaaa
caattcctcagccaagactgggtgacagccgccggagagaaggagcgagggaacaaattc
aatgaagcccttcacactctcctaagaatttacctggtgcatgtcgatgatgtcctgaag
gcggtcgaggaaatagcaggagtgggaatccctgagctcctcgctgcatccaaagatgag
agctctacgtcatggcctactctcaacaggtcaacattcctggtgttctacaaagtgttg
atggcagagctggaaaaggccatcaggaagattcccgctggcaatgtcagtgacaacact
gaggctcagagtgagaagctgctgacgtggaacctggctgtcagagatttccatgtcctg
gtcaacttagtgaaggtgtttgattccaggccggtgctcaatgtgtgcctgaagtatggc
cgccttttcctggagtctttcctgaagttggggatgccgctactagacaacagtttcaaa
aggcacatggaggatgtccagagtctgctgaaaaccttccagctcagcacccggcagctc
catcacatgtgtggacattctaagattctccaggatacaagcctgaccaatcacgtaccg
gccttaaagaagagcctcgagctgtttgtttacagagtgaaggccatgctgatgcttaac
aactgtcaggaggcattttggattggcaacctgaagaatcgcaacctaaagggtgaagag
attctttctcaacaatcacaaggaagtgatgaggatgaggatgaagatgaggagccacgt
tccccgctgcctggggataagtcagaggttgaggccgcagagacggactctgaggaaagt
aaggcagtcaacggagaggaagatgtggacgaagatgatgtcacagatgactctgattaa
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integrated database retrieval system