Pungitius pungitius (ninespine stickleback): 119194169
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Entry
119194169 CDS
T07626
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119194169 (ccdc174)
03041 Spliceosome [BR:
ppug03041
]
119194169 (ccdc174)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119194169 (ccdc174)
Spliceosome [BR:
ppug03041
]
Complex C
Other components
EJC/TREX
119194169 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
119194169
NCBI-ProteinID:
XP_037304200
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All DBs
Position
8:complement(14431588..14435121)
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AA seq
596 aa
AA seq
DB search
MDKKKKPFAVTASSLVDLKAELYRKQEQFKQEKLGHENSGAGFTSKPKIKKPNVWSKQNT
GVSARAEKDAEQLAEEQTSLDTSRRKLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKII
DKKREMYAQKETDRKDEESDNSSVPPPQNPDEEWVDYVDALGRSRRCMKKDLPGFRKMDQ
DFKGKGKASDDKTLLSEDMRRELQRQEWEREEEEAMKRPVGPIHYEDIRGQEARDLGVGY
FAFAHDEEQRRKQRETLDMLRDQTTDQRTKREQLKDKRQAILRARLAKVRQRKMKKAKLD
GTEDEQGEGETEGGEDEGEFLGSSPPPEDSPEISTVKKVVVEIQERKDTKPGVPHVREWD
RGKEFMFTEWTTRRREERDSDFAPPSAYFTEGKRPLKFQNKENKSNMSFKWTKDPAEISE
SKEEPQSQAEAVPSPPPPPPPQKQSPPPPSQPQPSSQASPTNHPADSAPLTAPPFNLQYP
TPPLYPQFSSPHFAGPHQLPPLFPPQYPNHYSPQCPPQFQPQYPPQYPPQYHPPYPSHYP
AQYTHQYPAQYPPQNPPGYAAPSQPQPPPPGETSHAPQPTESLDDMLSFYRNTTLS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaagaagaaacccttcgccgtgactgcttcatcgctggtggaccttaaagct
gaactgtacaggaagcaggaacaattcaaacaggaaaaacttggccatgaaaatagtgga
gctggattcacatcaaaacccaaaatcaagaaacctaatgtctggagtaaacaaaacact
ggggtttctgcaagagctgagaaagatgctgagcagctggctgaggagcagaccagcctg
gacacatcaagacgcaagttggaggagaaggccaaactctatgagcagatgacaaaggga
gactttcctgatgaagagacggagggactgttcctggtggatttcacccaaaagattatt
gacaaaaagagagaaatgtatgcacagaaggaaacggatagaaaggatgaggaaagcgac
aactcatctgtcccccctcctcaaaacccagatgaggaatgggtggattatgttgacgct
ttgggccgatctcgaagatgcatgaagaaagacctgccaggttttaggaaaatggaccaa
gactttaaaggaaaaggaaaagcttcagatgataagaccttactctcggaggatatgcgt
cgagagctgcagaggcaggagtgggagagggaggaagaggaggctatgaagagacctgta
gggccgatacactacgaggatattaggggacaagaggctcgagatctcggtgtaggttac
tttgcgttcgctcatgatgaagagcaacgcagaaagcagagagaaactctggacatgctg
agagaccagacaacagatcagcgcaccaagagggaacaactgaaggacaagaggcaggcc
atcctgcgggcccgcttggccaaagtgaggcagaggaagatgaagaaggccaaactggat
ggcactgaggacgagcagggagagggagagactgaaggaggggaggatgaaggtgaattt
ttagggtcctctcctccaccggaagactccccagaaataagcacagtgaagaaggtggta
gtggagatccaggaaaggaaggacaccaaaccaggagttcctcatgtcagagaatgggac
agaggcaaagaatttatgtttaccgagtggacaactcggcgtcgcgaagagcgagattcc
gattttgctcctccctctgcgtactttactgaggggaagagaccattgaagtttcaaaat
aaggagaataaatccaatatgtcctttaagtggaccaaagacccagcagaaatctctgag
agcaaggaggaaccgcagtctcaggctgaagcagttccttcccctcctcctcctcctcct
cctcaaaagcaaagtcctccacctccatcacaaccacagccttcatcgcaggcatcacct
accaatcacccagcagattcggctcctttgactgctcctccttttaatctccagtatcct
actcctccgctttatcctcaattttcttctcctcattttgctggaccgcatcagttacct
cccctgtttcccccacagtacccaaaccactattcaccccagtgtccccctcagtttcag
ccccagtatcccccccagtatcccccccagtatcaccccccgtatccctcccattatcct
gcccagtatacccaccagtaccccgcccagtatcctcctcagaatccacccgggtatgca
gctcccagccagcctcagcctccgccgcctggagagaccagccatgctcctcagcccaca
gagagtctggacgacatgctttccttttacaggaacactactttgtcataa
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