Pungitius pungitius (ninespine stickleback): 119194564
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Entry
119194564 CDS
T07626
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119194564 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119194564 (lrfn5b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_5
LRR_4
Ig_3
ig
Ig_2
LRR_9
Sp38
LRR_14
fn3
LRR_EndoS
V-set
C2-set_2
LRR_R13L1-DRL21
Ig_DSCAM-DSCAML_C
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
119194564
NCBI-ProteinID:
XP_037304578
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All DBs
Position
20:complement(2495629..2522703)
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AA seq
810 aa
AA seq
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MECLLVYLIVFGVAAKAHKVQVCPKRCVCQVLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTSIKRKDFSNMTKLVDLTLSRNTIGSIAPLAFKDLENLRALHLDSNRLARIIND
TFSGMSKLHHLNLNNNQLTHIQIGAFNDLTALEELDLSYNNLESAPWVAIQRMSNLHTLN
LDHNMLSYIPEGTFSGLQKLKRLDVTSNKLQKLPPDPIFQRAGVLATSGIMGPTSFALSF
GGNPLRCNCELLWLRRLRREDDLETCASPQHLAGRYFWTVFEEEFLCEPPLITRHSQELQ
ALEGQSVTLRCKARGDPDPIIHWIAPDGRLMSNSSRAAVHTDGTLDILISTVKDSGSFTC
VASNPAGEAQQTVDLVIAKLPHITNSTVAEQEPDPGSSDIATVTKTGADGGGLPLGNAKT
GPEKKVVIAEATSTSALVQFNFQRSIPGIRMFQIQYNGSYDDSLVYRMIPPTSKSILVNN
LAAGTRYDLCVLAIYDDQVTSLTATRVIGCSHFTTEPQYLRCHFMQSQFLGGTIVVIIGG
IIVASVLAFIIFLIVRYRVCNQGDADKALEMGDIRSLSSDGQLQGCGVPKSLSKQALRPE
RSEKERLRVAPPPPEPAKQRLPPPAAAAGGGSGGGKPSVPDCTVSTSAASHSWHPASPGA
PRPKRSVAAPKTPEARRAEAQADVELDGANRNISSAEVKMAAARGPAVALAAAGRHAKWT
AVPRGPRPQPAARHYMTVPAGAARGNRRHSLNADSQLERCYVARPQPGGGLRSKRSLSMS
GELPQLGGAASVRRARDKLSKSEWLLESTL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcctcctggtttacctgatagtcttcggcgtggctgcgaaggcccacaaagtc
caggtctgccccaagcgctgcgtctgccaggtgctgaaccccaacctggcgactctgtgc
gacaaaaaggggcttctctttgtgccccccaacatcgacaggcacacggtggagatgcgt
ctcggggataacttcgtcaccagcatcaagcgcaaagacttctccaacatgaccaagctg
gtggacctgacgctctcccggaacaccatcggctccatcgcgccgctcgctttcaaagac
ctggagaacctcagggcgcttcacctggacagcaaccggctggcgcgcatcatcaacgac
accttcagcggcatgtccaagctgcaccacctcaacctcaacaacaaccagctcacgcac
atccagatcggggctttcaacgacctgacggcgctggaagagctggacctatcctacaac
aacttggaaagcgcgccgtgggtggccatccagaggatgtccaacctccacaccctcaac
ctggaccacaacatgctcagctacatccccgagggcaccttctccggactgcagaagctc
aagcggctggacgtgacttccaacaagctgcagaagcttccccccgacccgattttccaa
agggccggggtcctggccacctcgggcataatgggtccgacgtcgttcgcgctgagcttc
gggggaaacccgctgaggtgcaactgcgagctgctgtggctgcgcaggctgcggcgggag
gacgatctggagacctgcgcctcgccgcagcacctggccgggcgttacttctggacggtt
ttcgaggaggagtttctgtgcgagcctccgctcatcaccaggcactctcaggagctgcag
gctctggagggtcagagtgtgactctgcgctgtaaggccaggggcgaccccgaccccatt
atccactggatcgcgcctgatggacgcctcatgtccaactcctccagggccgccgtccac
acagacggcacgctggacatcctcatcagcaccgtcaaggactctggctccttcacctgc
gtggcctccaacccggccggcgaggcgcagcagacggtggacctggtcatcgccaaactg
ccgcacatcaccaacagcaccgtcgcggagcaggagcccgaccccgggtcgtccgacatc
gccacggtgaccaagacgggcgcggacggcggagggttgcccctggggaacgcgaagacc
ggcccggagaagaaggtggtgattgccgaggccacgtccacctcggccctggtgcagttc
aacttccagaggagcatccctggaatacgcatgtttcagatccagtacaacggcagctac
gacgattcgctggtttacagaatgatacccccgaccagtaagagcatcctggtgaacaac
ctggcggccggtacgcggtacgacctgtgcgtgctggccatctacgatgaccaggtgacc
tcgctgaccgccaccagggtgataggctgcagccacttcaccaccgagccgcagtacctg
cgttgccatttcatgcagtcccagttcctcggcggcaccattgtggtcatcatcggaggg
atcatcgtggcctcggtgctcgccttcatcatcttcctcattgttcgctaccgtgtgtgt
aaccaaggagacgcagataaggcgctggagatgggggacatccgctcgctgagcagcgac
gggcagctgcagggctgcggcgtccccaagtcgctctccaagcaggccctgcgtccggag
aggagtgaaaaggagcgcctcagagtggccccgccgcccccggagccggccaagcagcgc
ctgccgccgccggcggccgcggcgggtggcggcagcggcggcggcaagccgtccgtcccc
gactgcaccgtctccacctcggccgccagccacagctggcacccggcctcccccggcgcc
ccgaggcccaagcgctccgtcgccgcgcccaaaacccccgaggcccgccgggccgaagct
caggcggacgtcgagctcgacggcgccaaccggaatatctcgtcggccgaggtaaaaatg
gccgccgcccgcggccccgccgtcgctctggcggctgccggccggcacgccaagtggacc
gctgtccccaggggcccgcggccccagccagccgctcgccattacatgactgtgcccgcg
ggggcggcaagggggaaccgccggcactccctcaacgcggactcacagctggagcgctgc
tacgtggcgcgaccccagccggggggcggcctgcgctccaagcggagcctgtcgatgagc
ggggagctgccgcagctggggggcgcggcgagcgttcggcgggccagggacaagctctcc
aagtccgagtggcttctggagagcactttgtga
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