Pungitius pungitius (ninespine stickleback): 119194637
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Entry
119194637 CDS
T07626
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119194637 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119194637 (capn3b)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
119194637 (capn3b)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C2: calpain family
119194637 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
119194637
NCBI-ProteinID:
XP_037304775
LinkDB
All DBs
Position
20:complement(10656891..10666297)
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AA seq
770 aa
AA seq
DB search
MGDKKCKAPLVEDTEARVLHETEASFEADDKADYPSAGTNSIYSAILSRNEAVKDAKRLK
TFLELRDKYVKKKVMFEDPLFPANDSSLFYSHKPSMKFEWKRPSEICENPQFIIDGANRT
DICQGELGDCWLLAAIACLTVNEKLLYRVIPPDQSFTDNYAGIFHFQFWRYGEWIDVVVD
DRIPTCNNHLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEFF
DLSEAPKDLHSIMRKALERGSLMGCSIDTLSASEQETRTDQGLVRGHAYSIIGLAECDEV
EKDTTIRLIRLRNPWGFVLWKGPWSANSTDWSTISIADKDNLIKQTVQESEFWMSFDDFK
KNFTKLEMCNLTPDTLDCEERHSWTVSVNEGRWVRGSSAGGCRNFPQTFWTNPQYRLQLY
EDDDDPEDGQAACTVVVALMQKGRRMQRHQGAKFLTIGFSIYEVPKEMCGQNQHLQKDFF
LYTASKAKCKTYINLREVTERVHLPRGEYAIIPTTFEPHQDGEFILRVFSEKKSTSEEVE
DTIGSEKTQQDRKKKEKPIVFVSDRARANKEIEHDGIQGEKKKKQPKQKLVQPEEETEEE
KQFRAIFQRIAGEDMQICANELKTIMRNVLAKHNEIKTEGFSLETCRSMIALMDTDGTGK
LNLQEFKHLWNKIKEWQRIFKRYDEDKSGSISSFEMRNAVNDAGFHLNKQLYDIIAMRYA
DEHLNIDFDSYICCFVRVEGMFRAFNAFDKDGDGIIKLNVLEWLQLTVYS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggggataagaaatgtaaagcgcctctcgttgaagatacggaggcgagagtgcttcat
gaaactgaagcatcatttgaggccgacgacaaagcggattacccttctgccggcacaaac
tccatctactcagcgattctaagcagaaacgaggctgtcaaggatgccaagcgtctcaag
acttttttggagctgcgggacaaatatgtgaagaagaaggtaatgtttgaagacccgctg
ttccctgcaaatgactcctcgctcttctacagtcacaagccttccatgaagttcgagtgg
aagcgtccctcggaaatttgtgaaaacccccagttcatcatagacggcgccaacaggaca
gacatctgtcagggagaattaggtgactgctggctgctggctgccatcgcctgtctcaca
gtgaacgagaagctgctgtaccgggtgattcccccggaccagagcttcaccgacaactac
gccggcatcttccattttcagttctggcgttatggcgaatggatcgatgttgtcgtggac
gatcgcatccccacctgcaacaaccacctggtgttcaccaaatctttcagaaagaacgag
ttctggagcgctcttttggaaaaagcttatgccaagttgcacggctcttatgaagcactt
aaagggggcaacaccttggaagccatggaggatttcactggcggagtgaccgagttcttt
gacttgtccgaggcgcccaaagacctccacagcatcatgaggaaggcgctggagagaggc
tcgctcatgggctgctccatagacactctttcagccagcgaacaggagactcggacggat
caggggctggtcaggggtcacgcctactccatcataggtttggcggagtgtgacgaggtt
gaaaaggacaccacgattcggctgattcgcctgcgtaatccctggggtttcgtgctgtgg
aaaggcccgtggagcgcaaactcgacggactggtccaccatctccatcgcagataaggac
aacctgatcaaacagactgtacaggagagtgagttctggatgtcgtttgatgatttcaag
aagaacttcaccaagctggagatgtgcaacttgacccccgacaccctggattgcgaggaa
agacacagctggacggtgtcagtcaatgagggtcgctgggtgagaggcagctctgccggc
ggctgcaggaacttcccacaaacgttctggacgaaccctcagtaccggctgcagctgtac
gaggacgacgacgacccggaggacgggcaggcggcttgtactgttgtcgtggctctgatg
cagaaaggccgaaggatgcagcgccatcaaggggctaaattcctcaccatcggattttct
atctacgaggtgccaaaggagatgtgcggacaaaaccaacacctgcagaaggacttcttc
ctgtacacggcctccaaagccaaatgcaaaacctacatcaacctgcgggaggtgacggag
cgcgtgcacctgcctcggggagagtacgccatcatccccaccacctttgaaccccatcag
gacggagagttcatcctgagggtgttctcggagaagaagagcacgtctgaggaagtggag
gacacaatcgggtcggagaaaacacagcaagacaggaaaaagaaagagaagccgattgtg
ttcgtgtcggacagagcacgagccaacaaagagattgagcacgacggcatccagggggaa
aagaagaagaagcagccgaagcaaaaactagtccaaccagaggaggagactgaagaggaa
aaacagttcagagccattttccaaaggattgctggcgaggacatgcaaatctgtgccaac
gagcttaagacgatcatgagaaacgtgctcgccaaacataacgaaatcaagacggaaggt
ttcagcctggagacgtgtcgcagtatgatcgcactgatggacactgatgggacggggaag
ctgaacctgcaggagttcaaacacttgtggaataagatcaaggagtggcagcggatcttc
aaacgatacgatgaagacaagtccggctccatcagcagcttcgagatgaggaacgccgtg
aatgacgcagggtttcacctcaacaagcagctgtacgacatcatcgccatgcgctacgca
gacgaacatctcaacatcgactttgacagttacatctgctgctttgtgagagtggagggc
atgttcagagcttttaatgcgtttgacaaagatggagatggaataataaaactcaatgtc
ctggagtggcttcagctgacggtgtattcttaa
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