Pungitius pungitius (ninespine stickleback): 119194709
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Entry
119194709 CDS
T07626
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
119194709 (gpcpd1)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
119194709 (gpcpd1)
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Gene cluster
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
PI-PLC-X
KGK
TreTu_C
Motif
Other DBs
NCBI-GeneID:
119194709
NCBI-ProteinID:
XP_037304911
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Position
20:complement(2191798..2204257)
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AA seq
646 aa
AA seq
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METTQVTLAVRGETSSGEVIAVVGSCEALGSWSYQNAVILLPDGGDEKIWTTTISMPKGV
VSKYRYLKGFFLQSKNAGGPRQVLVNMWETHQQPRMMSPTASHQNIDDGHFGIHNGVNCV
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGFEEEDEEEEEQEEHSPS
SLHKETTTLEISMISANGYKSRHSQPECGYALEPSQWTEYSIHSMDPYNLELTFEFFEED
MGEHVVQGDGLPGYVGTACLLSSSFSESGKDYGVATLPIMGRNSRQTIGKVRVDYLVIRP
IQGYQCEMSSSFTKYWKKRSTLNVGHRGAGSTHAARHQRVRENTIASFKSAAKHGAAYVE
FDVHLSKDAVPIVYHDLTCCISTKKKNDKTSLELIEVPVKDLTFDQLQLLKLVHATAIKE
TDNKDLLDDEEEIDEHQPFPSLSQIFQAIPEHVGFNIELKWICQLKDGSWDGNLSSYFNM
NTYLDIILSCVLQKGGKRRIVFSCFDPDICTMVRQKQNKYPILFLSQGITDKYTDLMDIR
CQSTQIAISFAQSENILGISGHTEELLKNRSYIADAQSKGLVVFSWGDDNNEHENRRRLR
EQGIDGLIYDRICECLVPYFDSSSSDPRNLHVKNENKTKVSADSVY
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacccaggtgaccttagctgtcagaggcgaaacgtcctcaggtgaggtgatt
gcagttgttggcagctgcgaagccctgggaagctggagctatcagaatgccgtgattttg
ctccctgatgggggcgatgaaaaaatatggactacaacgatctccatgcctaaaggagtt
gtgtccaagtatcgctatctcaaaggtttctttctgcagtcaaagaacgcagggggtccc
cgtcaagtgctagtcaatatgtgggagacccatcaacagccccgcatgatgagccccaca
gcgtcacaccaaaatattgatgatggacattttggaattcacaatggggtgaattgtgtt
gactctgggtggctcacgtgccagacagagattcgcctgcgtctgcactattcgaagacg
tctccggtgtctatcaccaagaagaaatacaagaagtctcgctttagaatcaagctgaca
ttagagggatttgaggaggaagacgaggaggaggaagagcaagaagagcacagtccttca
tctctgcacaaggagaccaccactctggagatcagtatgatcagtgcaaacggctacaag
tcgcgccactctcagcctgaatgtggctacgcgctggagccctcccagtggaccgagtac
agcatccacagcatggacccgtacaacctggagctcaccttcgagttctttgaggaggat
atgggtgagcacgtggtccagggggacggtctcccgggttacgtgggcacagcttgcctt
ctctcctcctccttctcggagagtgggaaggactacggagtggccacgctgcccataatg
ggccgaaattccagacagaccatcgggaaagtgcgagtggactacctggtgatccggccc
atccagggttaccagtgtgagatgagctcctccttcaccaagtactggaagaaaagaagc
actctgaatgtgggccacagaggagccggcagcacacatgcagccaggcaccagagagtc
agggagaacacaatagcttcattcaaaagcgctgccaagcatggtgcggcctacgtagag
tttgatgttcacctctccaaggatgctgttcccatcgtataccacgatctgacgtgctgc
atatccaccaagaagaagaacgacaagacgtctctggagcttatcgaggtgccggtcaaa
gacctgacttttgatcagctgcaacttctgaagctggtccatgccactgcaataaaagaa
actgataacaaagatctgctggatgacgaggaggaaatcgatgagcatcaacctttccct
tcactctcacagatcttccaggctattcctgagcatgtgggcttcaacattgagctcaaa
tggatctgccagttgaaggacggctcatgggatggcaacctgtcctcctacttcaacatg
aacacctatctcgacatcatcctgtcctgcgttctgcagaaaggaggaaagagacgcatc
gtcttctcctgcttcgacccggacatctgcaccatggtgcgtcagaagcagaacaagtac
cccatcctcttcctgagtcagggcatcacagacaagtatacggacctgatggacatccgc
tgccagtccactcagatcgccattagttttgcccagagcgagaatattctgggcatcagt
ggccacacggaggagctgctgaagaaccgctcctacatcgcggacgcccagtccaaaggc
ctggtggtgttcagctggggagatgacaacaacgagcacgagaaccggaggaggctgagg
gagcagggcatcgacggcctcatctatgatagaatatgtgaatgcttggtgccatatttt
gactcaagttcttcggatccgcgtaatctccatgtgaaaaatgaaaataagaccaaagtt
agtgctgacagtgtttattag
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