Pungitius pungitius (ninespine stickleback): 119194764
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Entry
119194764 CDS
T07626
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119194764 (taf1a)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
119194764 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
YozE_SAM_like
Motif
Other DBs
NCBI-GeneID:
119194764
NCBI-ProteinID:
XP_037305025
LinkDB
All DBs
Position
20:complement(11046008..11050818)
Genome browser
AA seq
417 aa
AA seq
DB search
MDDFQRELRLLKDSEGDADLSDDQSSKGTNSKLPAVKPRHVETRRTSSFQKSTKTCLRLI
TEALLHHRWQEAAEYMACFTQRLEEPKHGPVVQSKELIWRISTEILHHHPNSKMDDYNNI
YERMKHSGFTNYLMISLEHAFHLLHNGHIKDAKHQLSVAESWRHGNESVVQNKKTELIHV
YKGLLDYVMWCDKKSTFNHAENLDKHDNQDMNNLFRAASVHLKEILKKPGIWDPFILSYV
EMLEYYDDHEEALRVLNDYAYDNKFPPNPNAHVYLYRYLQRQNASEKKLMKVLKVLCALV
PSHELMLEYSGLLLKSDKITDIHKALGVVLEMLDFACWRSSLDAWKLLTAIIQKLKSQPN
WKDSVAEKMAARKDWWPALHFTSFHASKDSEENPELKEVKASLTTILCPGLMLKYKA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatgactttcaaagagagctacggcttctcaaagactctgagggtgatgcggattta
tcagatgaccagtcttcaaaggggacgaattccaaactccccgccgttaaaccccggcat
gtagagacacggagaacatctagttttcaaaagagtaccaaaacctgtctgcggctgatc
accgaagccctgctgcatcatagatggcaagaagcagcagaatacatggcctgtttcaca
cagagattagaggaaccaaaacacgggccagttgtgcagtccaaggagcttatttggaga
atcagcactgagatccttcaccatcacccgaactcaaagatggacgactacaacaacatc
tacgaacggatgaaacactcaggatttacaaattacctgatgatctctctggaacatgcc
ttccacctgctgcataacggtcacatcaaggacgcaaagcatcagctgtccgtcgctgaa
agttggcggcacgggaatgagtcggtagtgcagaataagaagactgaactgattcacgtc
tacaagggtttactggattatgtgatgtggtgtgacaaaaagtccaccttcaaccatgct
gagaatctcgacaagcatgacaaccaagacatgaacaacctcttcagagcggcctccgtg
catctaaaggagattttgaaaaaacctggcatctgggatcctttcatactgagttacgtt
gagatgctggagtactatgatgatcatgaggaggctctaagagtcctgaatgattacgca
tatgacaacaaatttccacctaatcccaacgctcacgtctatctgtaccggtacttacag
cggcaaaatgcttcagagaaaaaactgatgaaagtattgaaggtcctctgtgcattagtc
ccaagccatgagttgatgttggagtacagcggtctgctgcttaaatcagataaaatcacc
gacattcataaagctttaggagttgttctggaaatgctcgactttgcctgctggaggagc
agccttgatgcgtggaagcttttaacagccattattcaaaaactcaagtcacaacccaac
tggaaggactctgttgctgagaagatggctgcaagaaaagactggtggcctgccctgcac
ttcacgagcttccacgccagtaaagactctgaggagaacccggagcttaaagaagtgaag
gcatcactgacaacgatcctgtgccctggcctaatgctcaaatacaaagcttga
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