Pungitius pungitius (ninespine stickleback): 119194856
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Entry
119194856 CDS
T07626
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1 isoform X1
KO
K24682
patched domain-containing protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119194856 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Other domain-containing proteins
Patched domain-containing proteins
119194856 (ptchd4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
119194856
NCBI-ProteinID:
XP_037305197
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All DBs
Position
20:complement(15283729..15322816)
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AA seq
923 aa
AA seq
DB search
MCFIGGDGASAGGILWRMLRQVIHRGLRASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFTPETDLEVLVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRIILLAKS
GGNILELADQVLRVHKQVLDLRVNYKGFNYTFAHLCVLRHRDKRCLLDDIVTIFEDIGQA
VLSNSTFHKVPLSYPNTTLKDGRVSFIGHQLGGVSFSANSRDQQVKFARAVQITYYLRNH
GPVVQDAIAERWENEFCALVSRLSTAEAPNAPDQLHIQSLTSFSLWRDFHQTGVLAKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAITVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNVVNLLASNSPSVSYAATQQKYFSNYSPVIGFYIYEPVEYWNSTVQEH
LKTLSHGFNKISWMDNFFQYLRVVNVSASTKSEFISILKASFLRSPEYQHFNEDIIFSMN
RETEEYDIIASRMYLVARTAEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATDHTRTQCIKLALEEHGAAILQNASCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREREEIECIEVRENPDHVTNV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggagacggggcatcagcgggcgggattctgtggaggatgctgcgg
caagtgatccacagagggctcagggcttcgttctactggctgggcttattcgtcagcagg
caccccgtgttcttcctcaccgtccccgcggtcctcaccatcatcttcggatccaccgtg
ctcagccgattcacgccggagacggacctggaggtgctggtcgcgccgacccacagcctg
gccaagattgagcgcagtctcgccaacagtctgttccccattgaccagtcgaagcacaag
ctgtactcggatctgcacacgccgggcagatacggcaggatcatcctgctcgccaagtcc
ggggggaacatcctggagctcgccgaccaggtcctacgggtccacaagcaggtgctggac
ctgcgagttaattacaaagggttcaattacacgttcgcgcacctctgtgtgctgaggcac
cgggacaagcgctgcctgctggacgacatcgtcaccatcttcgaggacatcgggcaggcg
gtgctctccaacagcaccttccataaggtgcccctgagctacccgaacacgacgctgaag
gatggccgtgtgtcgttcatcggccaccagctgggaggcgtgtccttctcagccaacagc
cgcgaccagcaggtcaagtttgcccgcgccgttcagatcacctactacctccgcaaccat
ggacccgtggtgcaggatgccatcgccgagcgctgggagaacgagttctgcgcactggtc
agccggctgtcgacagccgaggcaccgaacgcgcccgaccagctccacatccagtcgctt
acctccttcagcctgtggcgcgacttccaccagactggcgtgttggccaagggggaggtg
ctggtcagcctggtgctggtgctcctggccgccaccatctccagctctatgcgggactgc
ctgagggggaagcccttcctgggcctgctgggcgtgctcaccatatgtatcgccaacgtg
accgctgctgggattttctttatatcagacgggaagtttaactccacgctgctggggatc
ccattcttcgccatgggccatggaaccaaaggtgtgtttgagctgctggcaggctggagg
agaacgagggaaaacctgcccttcaaggagcgtgtggcggacgcttttgctgatgtgatg
gtgtgctacactatgaccagctccctctacatcatcactttcggcatgggggctagcccc
ttcaccaacatcgagtcagtgaagattttctgtcagagcatgtgcgttgccatcacggtc
aactacttctacgttttctctttctatggctcttgcctggtgtttgccggacagctagag
cagaaccgctaccacagtgttttctgttgtaaaatcccctcggtggagtacctggaccgc
cagcccacatggttcaaaaccatgatgagtgatggccatgacttgtccacacaccacgac
agcgtaccttaccagaatcacttcatccagcactttctccgtgagcactacacagaatgg
attaccaacacctatgtcaagccttttgtagtcattctatatctgatctacgcctctttt
tcattcatgggatgtttacagatcagcgatggatcaaacgtagtgaacctgttggcaagt
aactctccgagtgtttcgtatgctgcgacccagcagaaatacttcagcaactacagtcct
gtgattgggttctacatttatgagcctgttgagtactggaactccacggtgcaggagcac
ctgaagaccctgagtcatggtttcaacaagatctcttggatggacaactttttccagtac
ctgcgtgtggtaaatgtgagcgcgtctaccaagagtgaattcatctccattctcaaggcg
tccttccttcgcagcccggagtaccagcacttcaatgaggacatcatattttccatgaac
cgcgagaccgaagagtacgatattatcgcctcgcggatgtacctggtggcacggacagca
gaaaagaagcgagaggaggtggtggagcttctggaaaagcttcgaccgttgatgctgatc
aacagcatcaagttcattgcattcaatcctacatttgtgttcatggaccgctacagctcg
tctgttatctcacccatcctgacctcaggcttcagcgtactcacaatactcatcctcact
ttcttcctagtcatcaacccattgggaaacttctggctcatcctcacggtaacgtccgtg
gagctgggcgtcttgggtttgatgaccctctggaacgttggcatggacagcatctcaatt
ctgtgccttatttataccctcaacttcgccatggatcactgtgcaccacacctttacact
tttgtgctggccactgaccacactaggacgcagtgcatcaagttggcactggaggagcac
ggggcagccatcctgcagaatgcatcctgctttgtgattgggatcatgccattggtgttt
gtgccttccaatctgacctatacactgttcaagtgctccctcctcacggcgggctgcacc
gtgctgcactgctttgtcatcctgcccgtcttcctgactttcttcccgccatccaagaag
agacacaagaagaagaaacgggccaaacgcaaagagcgagagagggaaagggagcgggag
agggaaagagaaagggaggaaatagagtgtattgaagtcagggagaatcctgatcatgtg
acaaatgtctga
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