Pungitius pungitius (ninespine stickleback): 119195023
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Entry
119195023 CDS
T07626
Symbol
lrfn2b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119195023 (lrfn2b)
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119195023 (lrfn2b)
Cell adhesion molecules [BR:
ppug04515
]
Immunoglobulin superfamily
SALM family
119195023 (lrfn2b)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119195023 (lrfn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
ig
LRR_1
fn3
Ig_2
LRR_5
LRR_9
LRRCT
DUF6479
Ig_C17orf99
PKD_6
Motif
Other DBs
NCBI-GeneID:
119195023
NCBI-ProteinID:
XP_037305493
LinkDB
All DBs
Position
20:complement(1785362..1843316)
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AA seq
784 aa
AA seq
DB search
MEHILCCLLVLGATVMTTCACPKYCVCQNLSESLGTLCPAKGLLFVPLDIDRSTVELRLG
GNYILRVTQQDFANMTDLVDLTLSRNTISYIQPFSFGDLETLRSLHLDNNRLTELGPDDL
RGLVNLQHLIVNNNQLGRIHDKALEDLAPSLEDVDLSYNNLVSLPWHSVRQMINLHQLSL
DHNLLDFIPEGTFADLDRLARLDLTSNRLQKLPPDPIFARAQDSMTLTTPYAPQLSLSLG
GNPLHCNCEMLWLRRLERDDDLETCASPPALKGRYFWNVKEEEFVCQPPLITQHTHRTLV
LEGQTAGLRCEAIGDPPPTIHWISPEDRLLGNSSRTAVYGNGTLSITITTSKDYGTFTCI
AANVAGESTASVEVSIVQLPHLSNGTGQPAPPKSRLSDITGSSRISKGGGGGGGPPERSV
SVSEVTAVSALVKWTVSKSSPKVKMYQLQYNCSDDEVLIYRMIPASSKAFLVTNLVSGTR
YDLCVLAAWDDTATTLTATNVVGCTHFVTQDDYPQCRSLPSQLLGGTMILVVGGVIVATL
LVFIVILVLRYKAADAEPPAGKLTSVIDTHSQTNGGRVGQNGLLMPPAEPKAKVAPRDEV
VEFKCGSLQSSLTSSSSSSGSVAGGQYSPNSTLANIWRSANPKPRSNLDHLLGALSQLEL
RGSQGRDPGGGGGGGGGAATSGKKGRADREPLLGRTLDSRLSRLLMLPLDPKPKRSQSFD
MGDVTGAGATAAARLSGKSRRIGGIWTRRSLSVNGMLLQCDEEGDTGGSKGTIDSADWVM
ESTV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggagcacatcctctgctgcctgctggtcctgggagccacggtgatgaccacctgtgcg
tgccccaagtactgtgtgtgccagaatctgtccgaatccctggggacattgtgtcccgcc
aaaggccttcttttcgtgcctctggacatcgaccgcagcacggtggagctccggctggga
ggcaactacatcctgcgcgttacccagcaggactttgccaacatgacggacctggtggac
ctgaccctctccaggaacaccatcagctacattcagcccttctcctttggcgacctggaa
accctgcgctctctccacctggacaacaaccgcttgaccgagctgggccccgatgacctg
agaggcctggtcaacctgcagcacctcatcgttaacaacaaccagctcggacgcatccac
gacaaggccttggaggacttggcgccttccttggaggacgtggacctgtcctacaacaac
ctggtgtctctgccctggcactctgtccgccagatgatcaacctgcaccagctgagcctg
gaccacaacctgctggacttcatcccggagggcaccttcgctgacctcgaccggctggcg
aggttggacctgacctcgaaccgcttgcagaagcttcccccggaccccatcttcgcccgc
gcccaggactcgatgacgttgaccactccctacgcgccgcagctctccctgagcctgggc
ggaaacccgctgcactgcaactgcgagatgctgtggctgcggcggctcgagagggacgac
gacctggagacctgcgcctccccgccggccctgaagggccgctacttttggaacgtgaag
gaggaggagtttgtgtgccagccgccgctcatcacgcagcacacgcacaggacgctggtg
ctggaggggcagaccgccggcctgcggtgcgaagccatcggggaccccccgcccaccatc
cactggatctcccccgaggaccggctgctgggcaactcgtcccggactgccgtgtacggc
aacgggaccctgagcatcaccatcaccacgtccaaggactacggcacgttcacctgcata
gcggccaacgtggccggggagtccaccgcctccgtggaggtgtccatcgtccagctcccc
cacctcagcaacggcaccgggcagccggcgccacccaagtcccgcctctcggacatcacg
gggagcagcaggatcagcaaaggcggcggcggcgggggcggcccgccggagaggagcgtg
tccgtctccgaggtgacggccgtctcggcgctggtcaagtggacggtgagcaagtcctcc
ccgaaggtgaagatgtaccagctccagtacaactgctccgatgacgaggttctaatttac
aggatgatcccggcctccagcaaagctttcctggtgaccaatctggtgtcggggacccgc
tacgacctgtgcgtgctcgccgcctgggacgacaccgccaccacgctgacggccaccaac
gtggtgggctgcacccatttcgtcacccaggacgactacccgcagtgccgctccctgccc
agccagctgctggggggcaccatgatcctggtggtggggggcgtcatcgtggcgaccctg
ctggtcttcatcgtcatcctcgtgctgcgctacaaggccgccgacgccgagccccccgcg
gggaagctgaccagcgtcatcgacacgcactctcagaccaacgggggccgcgtggggcag
aacgggctcctgatgccgccggcggagccgaaggccaaagtggccccgagggacgaggtg
gtggagttcaagtgcggctccctgcagagcagcctcacgtcgtcctcctcgtcctcgggc
tccgtggcggggggccagtacagccccaacagcacgctagccaacatttggaggtcggcg
aaccccaagccccggtccaacctggaccacctgctgggggccctgtcccagctggagctg
cgggggtcgcagggccgcgacccgggcgggggcggcgggggcggcgggggcgcggcgacc
tcggggaagaaaggccgcgcggacagggagccgctgctgggccggacgctggactccagg
ctgagccgcctcctcatgctgccgctggaccccaagcccaagaggagccagtccttcgac
atgggagacgtcactggcgccggcgccaccgccgccgcccggctgtccggcaaatcccgg
cggatcggcggcatctggaccaggaggagcctgtccgtgaacggcatgctgctgcagtgc
gacgaggagggggacacggggggcagcaaggggaccatagacagcgccgactgggtgatg
gagagtactgtctga
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