Pungitius pungitius (ninespine stickleback): 119195152
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Entry
119195152 CDS
T07626
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119195152 (brf1b)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
119195152 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
QWRF
Motif
Other DBs
NCBI-GeneID:
119195152
NCBI-ProteinID:
XP_037305760
LinkDB
All DBs
Position
20:98391..105972
Genome browser
AA seq
696 aa
AA seq
DB search
MSSRVCRTCGGSDIDVDQARGSAVCTGCGSVLEDNIIVSEVQFVEGSGGVSSAVGQFVSA
DGPVKAPLLGSGFHTSVGKESRAQTLQGGKRQIQQLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKTEHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
IDPCLYIPRFAHMLEFGLKTHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMH
KFRRTVKDVISVVKVCQTTLRKRLTEFEETPTSQLTIDEFMKVDLEQECDPPSFTAGQHK
TKMQQLEHELARKLDEVEGEISCYKDEIETELEKSRPKLRGIYAAYSNQIDPDEVSTRNP
QPEVLEMQDSDLQAAAQHLTQNFLCEVIQDEEGQGKKPEDSEQEAGSGEEGAGPHRQAAP
LAAILGKLPSAAGLSLQQTFQTFTDLEQDDKTDGEQSEGGELDLKDIDDQEIDKYILNDQ
EVEVKTELWMKQNAEYLKEQKEKEERIRKEKEEGTYKEKPKKSKKKREQIQALTAGEAIE
RMLEKKKISSKINYEVLRDLNSRGTGSGGGSSPSRVTSDPPNTAAATRKRLNRRRRRKTS
GANRELAATTSVMGKRVRLILSTPKKKKTTVQAENPVPLTTDVQSEASPAPQPDPSSAPS
APPTVVEEEEEEEEVEECVSALQLVGDYGCEEEEVF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggtgtgtcggacatgcggcgggtccgacatcgacgtggatcaggctcgg
ggcagcgcggtgtgcaccggctgtgggtcggttctggaggacaacatcatcgtctctgag
gttcagtttgtggagggaagtggaggagtgtcttcagctgtgggacagtttgtgtctgct
gatggtccggttaaggccccccttctaggttcgggttttcacaccagtgttgggaaagag
tccagagcccagaccctgcagggtggtaaacgacagatccagcagctgggcagtcaactg
cagctcaatcagcactgcttggacacggccttcaacttcttcaagatggtggtcagcaaa
cacctgaccagaggacgcaagacggagcacgtcatcgccgcctgcctctacctggtgtgc
cgcacagaggggacaccacacatgctgctggacctaagtgacctgctgcaggtgaacgtc
tacattctgggtaaaaccttcctgctgttggcccgagagctgtgcatcaacgcccccgcc
atcgacccttgtctgtacatccctcgatttgctcacatgttagagttcgggctgaagact
cacgaggtctccatgacggctcttcgtctggtccagaggatgaagagggactggatgcac
acgggtcgccgtccatctggtctctgtggagcagctctgctggtggcagctcggatgcac
aagttccgtcgtacggtgaaggatgttatcagtgttgtgaaggtctgccagaccacccta
aggaaaagattaacagagtttgaagagacgcccaccagtcagctgaccatcgatgagttc
atgaaagtcgatctggagcaagaatgtgacccgccttccttcaccgctggacagcacaaa
accaagatgcagcagctggaacacgagttggcccggaagctggatgaggttgaaggagag
atcagctgctacaaagacgagatcgagacggagctggagaagagccgacctaaactccga
ggaatctacgctgcctactccaatcaaatcgaccccgacgaggtctcgaccagaaaccct
cagccagaggtcctggagatgcaagactcagatctccaagccgccgcccaacacctgacc
cagaacttcctatgtgaagtgatccaggatgaagagggacagggcaagaagccagaggac
agtgagcaggaggcggggtctggcgaggaaggggcggggcctcaccgccaggccgctcct
ctggccgccatcctgggcaaactaccgagtgcagccggactgagcctccaacagaccttc
cagaccttcacagatttggaacaggacgacaaaacagacggtgagcagtcggagggtgga
gagttggacctgaaggacattgatgatcaggagatcgataagtacatcctgaatgatcag
gaggttgaggtgaagacggagctgtggatgaaacagaatgcagaatacctgaaggagcag
aaagagaaagaagagaggatcaggaaagagaaggaagaagggacctacaaagagaaaccg
aagaagtccaagaagaagagggagcagatccaggcgttgacggcgggcgaggccatcgaa
agaatgctggagaagaagaagatctccagtaagatcaactatgaggtccttagagaccta
aacagcagagggacaggaagtggggggggcagcagtcccagtagagtgacctccgacccc
ccaaacactgccgccgccacacggaaacggctcaaccgccgccggcgcaggaagaccagc
ggtgctaaccgagagctagcggctactaccagcgtcatggggaagagggtgcgactcatt
ctgtccacaccgaagaagaagaaaacaaccgtccaggccgaaaaccccgtccccctgaca
acagacgtccaatcagaggcgtcacctgcaccccaacccgacccaagctccgccccctct
gctccgcccactgtggtggaagaggaagaggaggaagaggaggtggaggagtgtgtcagc
gcgctgcagctcgtaggagattacgggtgtgaggaggaggaagtcttctag
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