Pungitius pungitius (ninespine stickleback): 119195185
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Entry
119195185 CDS
T07626
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03410
Base excision repair
ppug04210
Apoptosis
ppug04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119195185 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119195185 (parp1)
04217 Necroptosis
119195185 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppug03032
]
119195185 (parp1)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119195185 (parp1)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119195185 (parp1)
Enzymes [BR:
ppug01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
119195185 (parp1)
DNA replication proteins [BR:
ppug03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
119195185 (parp1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
119195185 (parp1)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119195185 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
119195185
NCBI-ProteinID:
XP_037305824
LinkDB
All DBs
Position
20:8358142..8368264
Genome browser
AA seq
1016 aa
AA seq
DB search
MADSQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSPADISGYSDLRWEDQEKVKKAIESGGATGGKGDQKSGAKGQKTLNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKTVDAEKPQLGLIDRWYHTACFVSRREELVFKSEYSAAQ
LKGFNALRAEDKEELEKRLPAVKTEGKRPSDEVDGPSKKQKKAEEDEKKKLDELLKNQSQ
LIWGLKDKLKKFCSTNDMKELLIANGQEVPSGESNVVDSLADAMAFGALEACKECKGQLV
FKGDAYYCSGDISAWTKCVFKTTTPIRRDWVTPKEFHEVPFLKKFKFKRQDRVYPKEAPT
QTLPKVKAEPLASASSAPTECLPEGAPADKPLTGMKLLTVGKLTKNKEELKVLVEEMGGK
ISATANKASLCISTKKEVEKMTKKMEEARDAGVRVVSEDFLADIKSSVKALQELISLHAI
SPWGAEVKVEAQASSAASKSGPLATKSTGKVKVKEEEGGSKSKKMKLTVKGGAAVDPDSG
LENSAHVLEQGGRMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGG
NKLDKVYDKNSALDNFLGVYKEKTGNDWSSSNFTKYPNKFYPLEIDYGQDEEAVKRLTAS
GGTKSKLAKPVQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLTEVQQ
AVSDTQSEAHILDLSNRFYTLIPHDFGMKKPPLLNSLDYIQAKVQMLDNLLDIEVAYSLL
RGGAQDNESDPIDINYEKLKTKIEVVDKTTEEAEIILQYVKNTHAATHNTYTLEVQEIFK
IVREGERQRFHPFEELHNRQLLWHGSRATNYAGIMSQGLRIAPPEAPVTGYMFGKGVYFA
DMVSKSANYCHTSRSEPVGLLLLAEVALGNMHELKKASHITKLPKGKHSVKGLGRSAPDP
SASVTLDGVQVPLGKGTNTNIDDTSLLYNEYIVYDVAQVNMKYLLKIKFNYQTSLW
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcggactctcaagaggacaagctgtacaaggcggaatatgccaaaagcggccgtgcg
tcgtgcaagaaatgcaaggaaaacatagcgaaagactcgctgagaatggccatcatggtg
cagtcccccatgttcgatggcaaagtcccccactggcaccacttctcctgcttttggctg
cgagcagcggcccagtcgcccgcggacatttctgggtattctgacctgcgctgggaggac
caggagaaagtcaagaaggccattgaaagtggtggagccacaggaggaaaaggggaccag
aagagtggagccaaaggacagaagacgctgaatgactttgccgtcgaatacgccaaatcg
aaccgcagcacgtgcaaaggctgcgatcagaaaatagaaaaggatcaaattcgtgtatcc
aagaaaaccgtggacgcggagaagccccaactgggtctgatcgaccgctggtaccacacg
gcgtgtttcgtgagccgcagggaggagctggtcttcaagtccgagtacagcgccgcccag
ctgaagggcttcaacgcgctacgggcagaagacaaggaggaactcgagaagaggctcccg
gccgtcaaaaccgaagggaagcgtccatctgatgaggtggacggaccgtcaaagaaacaa
aagaaagcggaagaggatgaaaagaagaagctggacgagctgttgaaaaaccaaagtcag
ctcatttggggactcaaggacaagctgaagaagttttgttcaaccaatgatatgaaggag
cttctgattgcgaatggccaagaggttccctctggagaatcgaacgtggtggactccctg
gccgatgccatggctttcggtgcccttgaggcttgcaaggagtgcaagggccagttggtt
ttcaagggcgacgcttattactgttcaggggacatctctgcctggacaaagtgtgttttc
aaaaccaccacgcccatacgcagagactgggtcacccccaaggaattccacgaagttccc
ttcctgaaaaaattcaagttcaagcgacaggaccgagtttacccgaaggaggcccctacc
caaaccctccccaaagtcaaagcggaacccttggcgagtgcatccagtgcccccacggag
tgcctgccagagggagcccccgcagacaaacctcttactggtatgaagctgctgaccgtg
ggaaagctcaccaagaacaaggaggagctgaaggttctcgtggaggagatgggcggaaag
attagcgccacggccaataaggcctccctctgcatcagcaccaaaaaggaggttgagaag
atgactaagaaaatggaggaagccagagacgctggcgtgcgcgtggtctccgaggacttc
ctcgcggacatcaagtcgtcggttaaagcccttcaagaactgatctccctgcacgccatc
tccccctggggggccgaggtcaaggtcgaggcacaagcttcgtctgcagcctccaagtct
ggaccgctggccaccaagagcacagggaaggtgaaggtgaaggaggaggaaggcggtagc
aaatccaagaagatgaaactcacggtcaaaggaggagctgctgtggacccagattcaggt
ctggagaacagcgctcatgtgttggagcagggcgggaggatgtacagtgccacgctgggc
cttgtggacatcgtcagaggaactaactcttactataaactgcagctgctggaggatgat
gttcagaaacggtactgggtcttccggtcgtggggcagagtgggcactaccatcggaggc
aacaagctggacaaggtctacgacaaaaactctgcactggacaacttcctgggtgtctac
aaagagaagacgggcaacgactggagctcctccaacttcaccaaataccccaataagttc
tacccgctggagattgactacggacaggacgaagaagctgtgaagaggctgacggccagt
ggtggcaccaagtccaagctggccaagcccgtccaggagctgatcaagatgatctttgat
gtggagagcatgaagaaggccatggtggagttcgagatcgacctccagaaaatgcccctg
ggaaagctgagtaagaggcagatccagagcgcctattctctcctcactgaagtacagcag
gctgtgtcagacactcagtccgaggcccacatcctggatctctccaatcgcttctacacc
ctgatacctcacgactttggcatgaagaaaccgccgctgctcaacagcctggactacatt
caagctaaagttcagatgttggacaacctgttggacatcgaggtagcgtacagcctgctg
agaggcggggcccaggacaatgagagcgaccccatcgacatcaactatgagaaactcaag
accaagattgaggttgttgacaagaccacagaagaagctgagatcattttacaatatgtg
aagaacacccacgctgctacacacaacacctacaccctcgaagtgcaagagatcttcaaa
attgtccgtgagggcgagcgccagcggttccatcccttcgaggagctacacaatcggcag
ctcctgtggcacggttctcgcgccaccaactacgctggcatcatgtctcagggtctccgc
atcgcccccccagaggctcctgtgactggttacatgttcggtaaaggtgtgtactttgcc
gacatggtgtccaagagtgcgaactactgtcacacctcccggtcagagcctgtgggcctc
ctgctgctggctgaggttgccctcggcaacatgcatgaattgaagaaggcatcccacatt
acaaaattacctaagggcaaacacagtgtcaaaggtttgggcagatctgctcctgatcct
agtgcatcggtcactttggatggggtgcaagtacctttgggaaaaggaaccaacactaac
attgatgacacaagtctcctgtacaacgagtacattgtgtatgatgtggcccaggtgaac
atgaagtatctcctgaagatcaagtttaactaccagacgtccctgtggtga
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