Pungitius pungitius (ninespine stickleback): 119195216
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Entry
119195216 CDS
T07626
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119195216 (prdm1c)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119195216 (prdm1c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_6
zf-C2H2_4
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
Zap1_zf1
zf-C2HE
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
119195216
NCBI-ProteinID:
XP_037305881
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All DBs
Position
20:complement(10150755..10159406)
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AA seq
770 aa
AA seq
DB search
MCGSSQGLAAPSQCTKAMLTSESSVQSAGSPQHATPETPDADMTSWSETTFDERCTYIVK
DQLLEELPQNNWRKTRAERSLPRNLALKRCPGSAEVLGVNSKELIPKGTRFGPLVGESYT
NETIPKDKDRKYFWRVFSEGRLHHILDGLNEERSNWMRYVNPACSEEGQNLIACQSGLEI
YFYTIKPLQPGQELLVWYCREFALRCNYPPLDQLAIDNIESRTVGKTTGKRGHSVSEILR
DEHSKSLPKRLERPFSQTNVPAVFPLCPRVVYPNQPQSDSIHGHGYASLPPLLSGSPPDS
RADKRSVLRGPVPSSLHFPIQPSQRPAVAKPYQEPSVPHRGPPALRPSPYLLPHHSLGLS
GILPHSYPCYGDGLKPHLTLSSHLLPFDGYSHFLHPLANRPKDMTIALSNTKQDLIRSPI
KEHRDNKELVSERTNYLRFHSEHLREHSPQSHVQTDLTTPATSSASSVVPSMHRALPSRS
PLDAFRDCLPSKSSSATESNTEDAMDLRKIKQGGQIVGYKNLSYPLTRQNGKIRYECNIC
EKVFGQLSNLKVHLRVHSGERPYKCQTCSKNFTQLAHLQKHYLVHTGEKPHECKVCLKRF
SSTSNLKTHQRLHSGEKPYQCKLCPARFTQFVHLKLHKRLHTGERPHRCPCCPCAYLHHC
SLRVHLQGFCPLSPSASRRHSPEELHQVNAEIERFDMSEAAEQLEFMAADAAMGRGDVTD
LIKKRETHTFNHQRKTELSTDKSAKECAADLPYSLHSTSIKLESGCLPEP
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcgtctcaaggcctcgcagccccgtcccagtgcaccaaagccatgttgacc
tcagagagttcagtgcaaagcgcagggtcaccgcagcatgcgacgcctgagacaccggat
gcagatatgacatcatggagcgagacaacgtttgatgagaggtgcacttacatcgtgaag
gaccaacttctggaggaactgccccaaaacaattggcgaaagacgcgagctgagagatcc
ttacccagaaacctggccctgaaacgctgccccggctctgcagaggtgctcggggtgaac
agtaaggagctgattcctaaggggacacgtttcggccctctggtgggggaaagctacacc
aacgaaacaattccgaaagataaagacaggaagtacttctggagggtcttctctgagggg
cgtctacaccacatcctggatggtttgaacgaggagaggagcaactggatgcgttacgtc
aacccggcctgttctgaggagggtcaaaacctgatcgcctgccagagcggtttggagatc
tacttctacacaatcaaaccacttcagccgggccaggagcttctggtgtggtactgccgt
gaatttgccctgcgctgcaactaccctccactggaccaactggctattgacaatattgag
agccgaacagtggggaagacaacagggaaacggggacacagcgtctctgaaatcctcaga
gacgaacattccaaatccctccccaaacgtctggaaagacctttctctcagaccaacgtc
ccagcagttttccccctgtgtccccgtgttgtgtacccaaaccagccccagtcagattcc
atccatggacatggatatgcaagtttaccacctctgctgtccggcagccctcccgatagc
agagctgacaagagatcagttcttagaggtcctgttccctccagtttgcacttcccaata
cagcccagtcaacgccccgctgtagccaaaccgtaccaagagccttccgtgcctcatcga
ggccctcctgctctgaggccttcaccctatctactgcctcaccactccctcggcctcagc
ggcattctacctcactcatacccgtgctacggagatggactgaaacctcacttaacactc
tcgtctcatttgctgccttttgacgggtactcacacttccttcatcctctggccaacaga
cccaaagacatgacgattgcactatccaacacaaaacaagacctcattcgttcaccaatc
aaggagcacagagacaataaggaactggtatcagaaaggacaaactacctcaggttccat
tcagagcaccttagagaacactctccacagagccatgtccagacagacctcacaacacca
gccacatcgagtgcctcatccgtggtcccctcaatgcacagagcactgccttctcgttcg
cctttggatgcctttagagactgcctcccttccaaatcctcctctgccactgagagcaac
actgaggatgcaatggacctcaggaagatcaaacaaggtgggcagattgtgggctacaag
aacttgtcttacccactcaccagacagaatgggaagatccggtatgagtgcaacatctgt
gaaaaggtctttgggcagctgtcgaacctcaaggtccatttgagagtgcacagcggagag
cgtccctataagtgtcagacctgcagtaagaactttactcaattagcccacctgcagaaa
cattacctggttcacactggagagaagccccacgaatgcaaggtgtgccttaagcgattc
agtagcaccagtaacttaaagacccaccagcggctacactcaggtgagaagccttaccag
tgcaagctatgccccgcccgcttcacgcaattcgtccacctcaagctccacaaacgcctc
cacaccggagaacgacctcacaggtgtccttgctgcccttgtgcctatctccaccactgc
agcctccgggtgcacctgcaaggcttctgtcctctctccccctcggcctcgcgcagacac
tcgccagaggagctgcaccaggtcaacgctgagattgaaaggtttgacatgagcgaggcg
gcggagcagctcgagttcatggcagcagatgccgcgatgggaaggggggatgtgactgac
ctaataaagaagagggagactcatacattcaaccaccaaaggaagacggagctgagcacc
gacaaatcagcaaaggagtgcgctgccgatctgccttactctctgcattcaaccagcatc
aagctggagtcaggctgcttaccagagccctaa
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