KEGG   Pungitius pungitius (ninespine stickleback): 119195266
Entry
119195266         CDS       T07626                                 
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119195266 (tbpl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppug03000]
    119195266 (tbpl1)
   03021 Transcription machinery [BR:ppug03021]
    119195266 (tbpl1)
Transcription factors [BR:ppug03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    119195266 (tbpl1)
Transcription machinery [BR:ppug03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     119195266 (tbpl1)
  RNA polymerase III system
    TFIIIB
     119195266 (tbpl1)
  RNA polymerase I system
    SL1/TIF-1B
     119195266 (tbpl1)
SSDB
Motif
Pfam: TBP P22_Gp10_C
Other DBs
NCBI-GeneID: 119195266
NCBI-ProteinID: XP_037305978
LinkDB
Position
20:7905347..7910257
AA seq 189 aa
MEPSNDDALDIIITNVVATFRVRCHLNLRTIALEGTNVIYKPEIGKVLMKLRKPKITASI
WSSGKIICTGATSEDDAKLGARRLARVLQKLGFKVRFSAFKVVNVLAVCSMPFGIQLVDF
TIKNRPIASYEPELHPAATYRIKHIKATVQVFSTGSITVTGPNVQNVATAVEQIYPLLFE
CRKPKPLGK
NT seq 570 nt   +upstreamnt  +downstreamnt
atggagccaagcaatgacgacgcactcgatatcatcatcaccaatgtggtggcgaccttc
agggtcaggtgccacctcaacctgcgcaccattgccttggagggaaccaatgtcatctat
aagccagaaatagggaaagtcctgatgaagctccggaagcccaaaataacggcctcgatc
tggtcctcggggaaaatcatctgcaccggagcaacgagcgaggatgacgcaaagctgggt
gctcgcaggttagcacgcgttctgcagaaactgggcttcaaggtgaggttttccgccttc
aaagtggtgaacgtcctggccgtgtgctccatgccgtttgggatccaacttgtagacttt
acaataaaaaaccgacccattgccagttatgaaccagagctccatccggccgccacgtac
aggatcaaacacataaaggctacggtccaggtgttctctactggcagcatcacagtcaca
ggaccaaatgtgcagaacgtggccacggccgtcgagcagatttacccgctgctgttcgag
tgtcggaagccgaaacccctcggcaaataa

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