KEGG   Pungitius pungitius (ninespine stickleback): 119195311
Entry
119195311         CDS       T07626                                 
Symbol
sf3b6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119195311 (sf3b6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppug03041]
    119195311 (sf3b6)
Spliceosome [BR:ppug03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    119195311 (sf3b6)
 Complex B
    119195311 (sf3b6)
 Complex C
   U2 SnRNP specific factors
    119195311 (sf3b6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_MUD2_C RRM_7 RRM_SRRT RRM_ACIN1
Other DBs
NCBI-GeneID: 119195311
NCBI-ProteinID: XP_037306040
LinkDB
Position
20:14333332..14335644
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYVRNLPYKITAEEMYDIFGKYGPIRQIRTGNTPESRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggctatgcaagcagcaaaacgcgcgaatatacgactgcccccggaggtgaacagaatc
ctgtacgtcaggaaccttccctacaaaatcacagctgaggaaatgtatgatatctttggg
aaatatggaccaatccgccaaatcagaacagggaacacgcctgaatcgagaggaacagcg
tatgtggtttatgaagacatctttgacgccaagaatgcctgcgaccatttgtcaggcttc
aatgtctgcaaccgttacctggtggtcctctactacaatgcaaacagagctttccagaag
atggacacaaagaagaaagaggaacagctgaaacttctaaaagagaaatacggcatcaac
acagaccccccaaagtag

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